An Interactive Atlas for Exploring Bacterial Genomes

BacMap is an interactive visual database containing hundreds of fully labeled, zoomable, and searchable maps of bacterial genomes.

Map-image

Some features of BacMap

  • Maps are available for 2989 bacterial chromosomes across 1,790 bacterial organisms.
  • Each map supports zooming and rotation.
  • Map gene labels are hyperlinked to detailed textual annotations.
  • Maps can be explored manually, or with the help of BacMap's built in text search and BLAST search.
  • A written synopsis of each bacterial species is provided.
  • Several charts illustrating the proteomic and genomic characteristics of each chromosome are available.
  • Gene sequences and protein sequences can be downloaded.
Reset BLAST Search Sample Query
Filter by Taxonomy
Archaeayes no
All
Crenarchaeota
Euryarchaeota
Korarchaeota
Nanoarchaeota
Thaumarchaeota
NA
Bacteriayes no
All
Acidobacteria
Actinobacteria
Aquificae
Armatimonadetes
Bacteroidetes
Chlorobi
Caldiserica
Chlamydiae
Chloroflexi
Chrysiogenetes
Cyanobacteria
Deferribacteres
Deinococcus-Thermus
Dictyoglomi
Elusimicrobia
Fibrobacteres
Firmicutes
Fusobacteria
Gemmatimonadetes
Lentisphaerae
Nitrospirae
Planctomycetes
Proteobacteria
Spirochaetes
Synergistetes
Tenericutes
Thermodesulfobacteria
Thermotogae
Verrucomicrobia
NA
Filter by Phenotype
yes no NA
Flagella
Human pathogen
Mobility
Number of membranesyes no
1
2
3
NA
Cell Shapeyes no
Cocci
Spirilla
SquareShaped
Coccobacilli
CurvedShaped
Tailed
Vibrios
Filamentous
Bacilli
NA
Oxygen requirementsyes no
Anaerobic
Microaerophilic
Aerobic
Facultative
NA
Temperature rangeyes no
Thermophilic
Mesophilic
Psychrophilic
Cryophilic
Hyperthermophilic
NA
Habitatyes no
Specialized
HostAssociated
Terrestrial
Multiple
Aquatic
NA
Gramyes no
Negative
Positive
NA
Biotic relationshipyes no
Free living
Symbiotic
Sporulationyes no
Sporulating
Nonsporulating
Number of Chromosomesyes no
1
2
3
Energy Sourceyes no
Autotroph
Carboxydotroph
Chemoautotroph
Chemoheterotroph
Chemolithoautotroph
Chemolithotroph
Chemoorganoheterotroph
Chemoorganotroph
Chemosynthetic
Chemotroph
Diazotroph
Heterotroph
Lithoautotroph
Lithoheterotroph
Lithotroph
Methanotroph
Methylotroph
Mixotroph
Obligate chemoautolithotroph
Oligotroph
Organoheterotroph
Organotroph
Photoautotroph
Photoheterotroph
Photolithoautotroph
Photolithotroph
Photosynthetic
Phototroph
Cell Arrangementyes no
Chains
Clusters
Filaments
Irregular colonies
Pairs
Singles
Tetrads
V-shaped forms
Plasmid Shapeyes no
Circular
Linear
Chromosome Shapeyes no
Circular
Linear
Displaying Genome 1 - 50 of 2989 in total
Organism Type Release date # of replicons Identifier Length GC content Maps Tools
Acaryochloris marina MBIC11017 chromosome 05/12/11 1/10 NC_009925 6503724 0.47
Acaryochloris marina MBIC11017 plasmid 07/25/08 2/10 NC_009926 374161 0.47
Acaryochloris marina MBIC11017 plasmid 04/27/09 3/10 NC_009927 356087 0.45
Acaryochloris marina MBIC11017 plasmid 07/25/08 4/10 NC_009928 273121 0.45
Acaryochloris marina MBIC11017 plasmid 04/09/10 5/10 NC_009929 226680 0.46
Acaryochloris marina MBIC11017 plasmid 07/25/08 6/10 NC_009930 177162 0.45
Acaryochloris marina MBIC11017 plasmid 04/27/09 7/10 NC_009931 172728 0.47
Acaryochloris marina MBIC11017 plasmid 07/25/08 8/10 NC_009932 155110 0.46
Acaryochloris marina MBIC11017 plasmid 07/25/08 9/10 NC_009933 120693 0.45
Acaryochloris marina MBIC11017 plasmid 02/20/08 10/10 NC_009934 2133 0.43
Acetobacter pas...3283-01 chromosome 04/18/11 1/7 NC_013209 2907495 0.53
Acetobacter pas...3283-01 plasmid 04/11/11 2/7 NC_013210 191799 0.53
Acetobacter pas...3283-01 plasmid 04/16/10 3/7 NC_013211 182940 0.53
Acetobacter pas...3283-01 plasmid 04/16/10 4/7 NC_013212 49961 0.54
Acetobacter pas...3283-01 plasmid 10/02/09 5/7 NC_013213 3204 0.54
Acetobacter pas...3283-01 plasmid 10/02/09 6/7 NC_013214 3035 0.56
Acetobacter pas...3283-01 plasmid 10/02/09 7/7 NC_013215 1815 0.59
Acetobacter pas...-01-42C chromosome 08/27/09 1/1 AP011163 2815241 0.53
Acetobacter pas...3283-03 chromosome 08/27/09 1/1 AP011128 2907287 0.53
Acetobacter pas...3283-07 chromosome 08/27/09 1/1 AP011135 2906044 0.53
Acetobacter pas...3283-12 chromosome 08/27/09 1/1 AP011170 2904624 0.53
Acetobacter pas...3283-22 chromosome 08/27/09 1/1 AP011142 2907267 0.53
Acetobacter pas...3283-26 chromosome 08/27/09 1/1 AP011149 2907309 0.53
Acetobacter pas...3283-32 chromosome 08/27/09 1/1 AP011156 2904642 0.53
Acetohalobium a...SM 5501 chromosome 07/05/11 1/1 NC_014378 2469596 0.37
Acholeplasma laidlawii PG-8A chromosome 01/04/11 1/1 NC_010163 1496992 0.32
Achromobacter xylosoxidans A8 chromosome 06/01/11 1/3 NC_014640 7013095 0.66
Achromobacter xylosoxidans A8 plasmid 01/14/11 2/3 NC_014641 98156 0.62
Achromobacter xylosoxidans A8 plasmid 01/25/11 3/3 NC_014642 247895 0.61
Acidaminococcus...M 20731 chromosome 07/05/11 1/1 NC_013740 2329769 0.56
Acidianus hospitalis W1 chromosome 05/12/11 1/1 NC_015518 2137654 0.34
Acidilobus sacc... 345-15 chromosome 08/06/10 1/1 NC_014374 1496453 0.57
Acidimicrobium ...M 10331 chromosome 07/25/11 1/1 NC_013124 2158157 0.68
Acidiphilium cryptum JF-5 chromosome 06/21/11 1/9 NC_009484 3389227 0.68
Acidiphilium cryptum JF-5 plasmid 07/26/08 2/9 NC_009467 203589 0.62
Acidiphilium cryptum JF-5 plasmid 04/28/09 3/9 NC_009468 187422 0.62
Acidiphilium cryptum JF-5 plasmid 04/28/09 4/9 NC_009469 88953 0.62
Acidiphilium cryptum JF-5 plasmid 07/26/08 5/9 NC_009470 37415 0.6
Acidiphilium cryptum JF-5 plasmid 07/26/08 6/9 NC_009471 37155 0.61
Acidiphilium cryptum JF-5 plasmid 07/26/08 7/9 NC_009472 8781 0.61
Acidiphilium cryptum JF-5 plasmid 05/24/07 8/9 NC_009473 5629 0.58
Acidiphilium cryptum JF-5 plasmid 07/26/08 9/9 NC_009474 4909 0.59
Acidiphilium multivorum AIU301 chromosome 03/18/11 1/9 NC_015186 3749411 0.68
Acidiphilium multivorum AIU301 plasmid 03/02/11 2/9 NC_015178 271573 0.63
Acidiphilium multivorum AIU301 plasmid 03/02/11 3/9 NC_015179 54248 0.61
Acidiphilium multivorum AIU301 plasmid 03/03/11 4/9 NC_015180 14328 0.59
Acidiphilium multivorum AIU301 plasmid 03/03/11 5/9 NC_015181 12125 0.6
Acidiphilium multivorum AIU301 plasmid 03/03/11 6/9 NC_015182 1729 0.61
Acidiphilium multivorum AIU301 plasmid 03/03/11 7/9 NC_015187 65564 0.62
Acidiphilium multivorum AIU301 plasmid 03/03/11 8/9 NC_015188 40588 0.6
Displaying Genome 1 - 50 of 2989 in total