Acaryochloris marina MBIC11017
Names | Acaryochloris marina MBIC11017 |
---|---|
Accession numbers | NC_009925, NC_009926, NC_009927, NC_009928, NC_009929, NC_009930, NC_009931, NC_009932, NC_009933, NC_009934 |
Background | Cyanobacteria are oxygenic, phototrophic organisms. They encode two photosystems (PSI and PSII) releasing electrons from water and fix carbon dioxide via the Calvin-Benson-Bassham pathway. Thus they absorb large quantities of C(O)2 and produce (O)2. Some cyanobacteria are also able to fix (N)2.This cyanobacterium was first collected from a colonial ascidian from the Palau Islands; it has since been collected as a free-living organism in Japan and the USA. It is unusual in containing chlorophyll d as the major (95%) and chlorophyll a as the minor (5%) photosynthetic pigments with phycocyanin and trace amounts of chlorophyll c. Oxygenic photosynthesis based on chlorophyll d may have evolved as an acclimatization to far-red light environments, or an as intermediate between the red-absorbing oxygenic and the far-red-absorbing anoxygenic photosynthesis that uses bacteriochlorophylls. Because of the unusual ratio of chlorophyll a to chlorophyll d in this organism, it has been used as a model to study the spectrographic characteristics of the two pigments. (HAMAP: ACAM1) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Cyanobacteria |
Class: | NA |
Order: | Chroococcales |
Family: | NA |
Genus: | Acaryochloris |
Species: | marina |
Strain | MBIC 11017 |
Complete | Yes |
Sequencing centre | (17-OCT-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA (27-AUG-2007) Pharmaceutical Genomics Division, Translational Genomics Research Institute, 13208 E Shea Blvd, |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | Sanger, 454-GS20 |
Isolation site | Prochloron-dominated colonial ascidian Lissoclinum patella off the tropical coast of the Palau islands |
Isolation country | NA |
Number of replicons | 10 |
Gram staining properties | Negative |
Shape | Cocci |
Mobility | No |
Flagellar presence | No |
Number of membranes | 2 |
Oxygen requirements | Aerobic |
Optimal temperature | NA |
Temperature range | Mesophilic |
Habitat | Aquatic |
Biotic relationship | Symbiotic |
Host name | NA |
Cell arrangement | Singles |
Sporulation | NA |
Metabolism | NA |
Energy source | Photosynthetic |
Diseases | None |
Pathogenicity | No |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Fatty acid metabolism
Ubiquinone and other terpenoid-quinone biosynthesis
Photosynthesis
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Arginine and proline metabolism
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Glutathione metabolism
Amino sugar and nucleotide sugar metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
One carbon pool by folate
Carbon fixation in photosynthetic organisms
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Sulfur metabolism
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Fatty acid metabolism
Ubiquinone and other terpenoid-quinone biosynthesis
Photosynthesis
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Arginine and proline metabolism
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Glutathione metabolism
Amino sugar and nucleotide sugar metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
One carbon pool by folate
Carbon fixation in photosynthetic organisms
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Sulfur metabolism
Aminoacyl-tRNA biosynthesis