| Definition | Acidimicrobium ferrooxidans DSM 10331 chromosome, complete genome. |
|---|---|
| Accession | NC_013124 |
| Length | 2,158,157 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 9 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 428637..428648 | attL CGGTCGAGGCAG | N/A | Click |
| 2 | 440243..441286 | PROPHAGE_Escher_MG1655: glycation-binding protein, predicted protease/chaperone; essential for genome maintenance; Afer_0442; phage(gi16130960) | 4e-67 | Click |
| 3 | 441360..441653 | PHAGE_Bacill_36: GroES; Afer_0443; phage(gi156564025) | 4e-14 | Click |
| 4 | 441656..443290 | PHAGE_Halocy_JM_2012: chaperonin GroEL; Afer_0444; phage(gi389060206) | 1e-64 | Click |
| 5 | complement(443590..444081) | membrane protein of uknown function UCP014873; Afer_0445 | N/A | Click |
| 6 | 444888..445208 | PROPHAGE_Xantho_33913: ISxac3 transposase; Afer_0446; phage(gi21231087) | 4e-09 | Click |
| 7 | 445208..446077 | PROPHAGE_Escher_MG1655: IS3 transposase B; Afer_0447; phage(gi16128284) | 2e-35 | Click |
| 8 | 446155..446712 | PHAGE_Equid__1: envelope glycoprotein J; Afer_0448; phage(gi50313312) | 1e-05 | Click |
| 9 | 446709..447626 | PHAGE_Invert_6: 443R; Afer_0449; phage(gi15079154) | 9e-08 | Click |
| 10 | 447623..449665 | PHAGE_Acidia_virus: hypothetical protein ATV_gp67; Afer_0450; phage(gi75750417) | 2e-10 | Click |
| 11 | 452991..453002 | attR CGGTCGAGGCAG | N/A | Click |
Region 2, total : 7 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1348604..1348615 | attL GCCGCAGCACTC | N/A | Click |
| 2 | complement(1362271..1363677) | PHAGE_Cronob_vB_CsaM_GAP32: long tail fiber proximal subunit; Afer_1311; phage(gi414087138) | 7e-08 | Click |
| 3 | 1363910..1363921 | attL CCTTCCCCCATT | N/A | Click |
| 4 | complement(1366330..1366403) | tRNA | N/A | Click |
| 5 | 1366433..1367374 | PHAGE_Salmon_7_11: hypothetical protein; Afer_1314; phage(gi345461254) | 2e-12 | Click |
| 6 | 1367396..1367725 | PHAGE_Burkho_phiE125: ISBt3 transposase subunit protein; Afer_1315; phage(gi17975201) | 1e-10 | Click |
| 7 | 1367722..1368600 | PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfB; Afer_1316; phage(gi24373866) | 8e-46 | Click |
| 8 | 1368798..1368809 | attR CCTTCCCCCATT | N/A | Click |
| 9 | 1369144..1369158 | attL GGCGCGCATCGAGGC | N/A | Click |
| 10 | complement(1369292..1370170) | PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfB; Afer_1319; phage(gi24373866) | 7e-39 | Click |
| 11 | complement(1370167..1370496) | PHAGE_Burkho_phiE125: ISBt3 transposase subunit protein; Afer_1320; phage(gi17975201) | 3e-08 | Click |
| 12 | 1371095..1371109 | attR GGCGCGCATCGAGGC | N/A | Click |
| 13 | complement(1371434..1372252) | PHAGE_Mycoba_Tweety: gp43; Afer_1321; phage(gi157311232) | 8e-07 | Click |
| 14 | complement(1372332..1372404) | tRNA | N/A | Click |
| 15 | 1372485..1374932 | PHAGE_Cafete_BV_PW1: putative isoleucyl-tRNA synthetase; Afer_1322; phage(gi310831495) | 3e-08 | Click |
| 16 | 1389133..1389144 | attR GCCGCAGCACTC | N/A | Click |
Region 3, total : 11 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1480690..1480701 | attL CAAGCCCCCACC | N/A | Click |
| 2 | complement(1480972..1481496) | phage tail protein; Afer_1416 | N/A | Click |
| 3 | complement(1481505..1483457) | PHAGE_Bacill_BCD7: putative baseplate J family protein; Afer_1417; phage(gi422936037) | 9e-15 | Click |
| 4 | complement(1483457..1483894) | PHAGE_Bacill_BCD7: putative GPW/gp25 family protein; Afer_1418; phage(gi422936038) | 7e-08 | Click |
| 5 | complement(1483925..1486573) | PHAGE_Saimir_1: transcriptional regulator ICP4; Afer_1419; phage(gi312162868) | 4e-07 | Click |
| 6 | complement(1486570..1487046) | PHAGE_Bacill_BCD7: putative tail tube protein 2; Afer_1420; phage(gi422936047) | 4e-07 | Click |
| 7 | complement(1487043..1487216) | hypothetical protein; Afer_1421 | N/A | Click |
| 8 | complement(1487213..1487686) | hypothetical protein; Afer_1422 | N/A | Click |
| 9 | complement(1487690..1488172) | PHAGE_Bacill_BCD7: putative tail tube protein 2; Afer_1423; phage(gi422936047) | 8e-06 | Click |
| 10 | complement(1488188..1489756) | PHAGE_Bacill_BCD7: putative tail sheath protein; Afer_1424; phage(gi422936048) | 9e-70 | Click |
| 11 | 1490131..1490511 | PHAGE_Feldma_virus: putative integrase/resolvase; Afer_1425; phage(gi197322352) | 4e-05 | Click |
| 12 | 1490508..1490753 | site-specific integrase-resolvase-like protein; Afer_1426 | N/A | Click |
| 13 | 1499983..1499994 | attR CAAGCCCCCACC | N/A | Click |