| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is yvyE [H]
Identifier: 239616671
GI number: 239616671
Start: 290143
End: 290769
Strand: Direct
Name: yvyE [H]
Synonym: Kole_0264
Alternate gene names: 239616671
Gene position: 290143-290769 (Clockwise)
Preceding gene: 239616670
Following gene: 239616672
Centisome position: 12.6
GC content: 43.38
Gene sequence:
>627_bases TTGAGCTGTTATCTTTCACTAACTGGGACCGTCTCTTTTGAAGTGAATATAAAGCGTTCCGTTTTCATAGGTAACGCAGC ACATTGTGAAACGGAGGAAGAAGCCAAAAGATTCATCAGAGACGTAGCTGCTAAGTACAGGGATGCTAGCCATAATTGCT GGGCTTACAAGGTAATTGGTAATGGCGTTGAAAAGTTCAATTTTTCCGATGCCGGCGAACCCCATGGGAGCGCCGGTCGG CCTATTTTTTCGGCCATTGAAGAGCTAAACATGACAAACGTGGCCATCGTTATTACAAGATACTTTGGCGGAACAAAGCT TGGTGTACGGGGGTTAATAGACGCCTATCGGTCAACCGCACGATCCACTCTGGAACAAGGGGAAAAAGGAAGATACTGTC CCGGAAAGGTATTTAGTGTCCAGGTTAATTACAGCATATGGAACATGTTCGTTGGAAAATTTGTTGAGGGAAAAGACTTC AATATTCAAGACATCGATTTCGGCGCTTCAGTAAAAGCCAAAATCTCCTGTAGAGTGGAAAACCTTGATGTTCTCATCTC CTTCTTCAAGGAAAGGCAAATAGAAGTAGAGATGAATGGTAACATCGTCTTTGTTGAAAAGGTGTAA
Upstream 100 bases:
>100_bases GGAAAAGGCTGGTTGTCTATGAAGAGACGCTGCCAGATTCAAAATTCATACTCAGCCCAGATATGAGCTTCATTGAAAAA CTGATGAAAGGTGAATAGGA
Downstream 100 bases:
>100_bases AGGCTATCAGGGGGGATGGCGATGAAGATATTCATTTCGACAGATATGGAAGGCATTGCGGGGGTAGTCTCCTGGAACGA GATGAAGTCAAACAACAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MSCYLSLTGTVSFEVNIKRSVFIGNAAHCETEEEAKRFIRDVAAKYRDASHNCWAYKVIGNGVEKFNFSDAGEPHGSAGR PIFSAIEELNMTNVAIVITRYFGGTKLGVRGLIDAYRSTARSTLEQGEKGRYCPGKVFSVQVNYSIWNMFVGKFVEGKDF NIQDIDFGASVKAKISCRVENLDVLISFFKERQIEVEMNGNIVFVEKV
Sequences:
>Translated_208_residues MSCYLSLTGTVSFEVNIKRSVFIGNAAHCETEEEAKRFIRDVAAKYRDASHNCWAYKVIGNGVEKFNFSDAGEPHGSAGR PIFSAIEELNMTNVAIVITRYFGGTKLGVRGLIDAYRSTARSTLEQGEKGRYCPGKVFSVQVNYSIWNMFVGKFVEGKDF NIQDIDFGASVKAKISCRVENLDVLISFFKERQIEVEMNGNIVFVEKV >Mature_207_residues SCYLSLTGTVSFEVNIKRSVFIGNAAHCETEEEAKRFIRDVAAKYRDASHNCWAYKVIGNGVEKFNFSDAGEPHGSAGRP IFSAIEELNMTNVAIVITRYFGGTKLGVRGLIDAYRSTARSTLEQGEKGRYCPGKVFSVQVNYSIWNMFVGKFVEGKDFN IQDIDFGASVKAKISCRVENLDVLISFFKERQIEVEMNGNIVFVEKV
Specific function: Unknown
COG id: COG1739
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IMPACT family [H]
Homologues:
Organism=Escherichia coli, GI87082338, Length=146, Percent_Identity=34.2465753424658, Blast_Score=74, Evalue=9e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR020568 - InterPro: IPR000640 - InterPro: IPR015796 - InterPro: IPR015269 - InterPro: IPR020569 - InterPro: IPR001498 [H]
Pfam domain/function: PF09186 DUF1949; PF01205 UPF0029 [H]
EC number: NA
Molecular weight: Translated: 23270; Mature: 23139
Theoretical pI: Translated: 7.86; Mature: 7.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCYLSLTGTVSFEVNIKRSVFIGNAAHCETEEEAKRFIRDVAAKYRDASHNCWAYKVIG CEEEEEEEEEEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEC NGVEKFNFSDAGEPHGSAGRPIFSAIEELNMTNVAIVITRYFGGTKLGVRGLIDAYRSTA CCHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHH RSTLEQGEKGRYCPGKVFSVQVNYSIWNMFVGKFVEGKDFNIQDIDFGASVKAKISCRVE HHHHHCCCCCCCCCCEEEEEEECHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEEEEC NLDVLISFFKERQIEVEMNGNIVFVEKV HHHHHHHHHHCCEEEEEECCCEEEEEEC >Mature Secondary Structure SCYLSLTGTVSFEVNIKRSVFIGNAAHCETEEEAKRFIRDVAAKYRDASHNCWAYKVIG EEEEEEEEEEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEC NGVEKFNFSDAGEPHGSAGRPIFSAIEELNMTNVAIVITRYFGGTKLGVRGLIDAYRSTA CCHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHH RSTLEQGEKGRYCPGKVFSVQVNYSIWNMFVGKFVEGKDFNIQDIDFGASVKAKISCRVE HHHHHCCCCCCCCCCEEEEEEECHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEEEEC NLDVLISFFKERQIEVEMNGNIVFVEKV HHHHHHHHHHCCEEEEEECCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 3141378; 8313894 [H]