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The map label for this gene is sgcQ [H]

Identifier: 239616569

GI number: 239616569

Start: 177918

End: 178700

Strand: Direct

Name: sgcQ [H]

Synonym: Kole_0161

Alternate gene names: 239616569

Gene position: 177918-178700 (Clockwise)

Preceding gene: 239616568

Following gene: 239616570

Centisome position: 7.73

GC content: 40.36

Gene sequence:

>783_bases
ATGGCTACTGTAAAGGAAATCTTTGGAAAAGAAAAAGTAATAATTGGTATGGTGCATTTTCCACCGCTTCCTGGTTCTCC
GTTGTATGACGACAAAAAAGGGGTGGAATTCATCGTTGAAAGAATAAAAAGCGATCTTAAATCCCTTCAAAATGGCGGAA
TAGATGCGGTTATGTTTTGTAACGAGAACGACAGGCCATACAAACTGAAGGTGGATTCTGCCACAGTGGCTACCATGAGC
AGAGCAATTGGAGAGGTTATGGATGAAATAAGGGTTCCTTTTGGCGTAGATGTTTTATGGGATCCGTTTGCCGCGATAGC
CATAGCTAAAGCTGTTGGAGCTAAATTCATCAGGGAAATTATAACTGGAACTTACGTTTCAGATATGGGGCTCTGGAAAA
CGGAAGTTGGAGAATTTTACAGATATAGAAAATTACTCGATGCTAATGATATAGCGGTGTTTTTTAATATATCTGCTGAG
TTTGCCTACAACCTTGACAGAAGACCTTTAGAAGAAATAGCAAAAAGTGTTGCTTTCTCCTCACTTGCTGATGTAATACT
CGTCTCTGGCCCGATGACAGGTGAATCGCCTTCTCTGGATCACATAAAGAAGGTCAAAGACAAAGTAGGTGAAAAACCCG
TCTTTGCCAATACTGGTGTAACCAAAGAAAACGTAAGAGAGATACTCAACATAGCTGATGGCGCCATAATTGGTACAAGC
TTGAAAAAAGATGGAATCACAAGGCGTTTCTGGAATGGTTCCTACTTTAATTCTCATAGATGA

Upstream 100 bases:

>100_bases
GCGTGGACATCATAATAACCACGCCTGGAATTGACGCCGACACTCTAAAGCAACTCGAAGACAAGGGTGTAAGGATCGTG
ATTGTGTGAGGAGGGAAAAT

Downstream 100 bases:

>100_bases
AAATGGGAAACCTCTATATAACTCAATCCAGCAAAATGACAGTAGAGCGATAGAAGAAATAGAATACTTCAAAAAGATGA
TAGACAAAGAAGTATACTTT

Product: photosystem I assembly BtpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MATVKEIFGKEKVIIGMVHFPPLPGSPLYDDKKGVEFIVERIKSDLKSLQNGGIDAVMFCNENDRPYKLKVDSATVATMS
RAIGEVMDEIRVPFGVDVLWDPFAAIAIAKAVGAKFIREIITGTYVSDMGLWKTEVGEFYRYRKLLDANDIAVFFNISAE
FAYNLDRRPLEEIAKSVAFSSLADVILVSGPMTGESPSLDHIKKVKDKVGEKPVFANTGVTKENVREILNIADGAIIGTS
LKKDGITRRFWNGSYFNSHR

Sequences:

>Translated_260_residues
MATVKEIFGKEKVIIGMVHFPPLPGSPLYDDKKGVEFIVERIKSDLKSLQNGGIDAVMFCNENDRPYKLKVDSATVATMS
RAIGEVMDEIRVPFGVDVLWDPFAAIAIAKAVGAKFIREIITGTYVSDMGLWKTEVGEFYRYRKLLDANDIAVFFNISAE
FAYNLDRRPLEEIAKSVAFSSLADVILVSGPMTGESPSLDHIKKVKDKVGEKPVFANTGVTKENVREILNIADGAIIGTS
LKKDGITRRFWNGSYFNSHR
>Mature_259_residues
ATVKEIFGKEKVIIGMVHFPPLPGSPLYDDKKGVEFIVERIKSDLKSLQNGGIDAVMFCNENDRPYKLKVDSATVATMSR
AIGEVMDEIRVPFGVDVLWDPFAAIAIAKAVGAKFIREIITGTYVSDMGLWKTEVGEFYRYRKLLDANDIAVFFNISAEF
AYNLDRRPLEEIAKSVAFSSLADVILVSGPMTGESPSLDHIKKVKDKVGEKPVFANTGVTKENVREILNIADGAIIGTSL
KKDGITRRFWNGSYFNSHR

Specific function: Unknown

COG id: COG0434

COG function: function code R; Predicted TIM-barrel enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BtpA family [H]

Homologues:

Organism=Escherichia coli, GI1790757, Length=250, Percent_Identity=46.8, Blast_Score=236, Evalue=8e-64,
Organism=Caenorhabditis elegans, GI115532828, Length=243, Percent_Identity=29.6296296296296, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24659916, Length=256, Percent_Identity=30.46875, Blast_Score=97, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005137
- InterPro:   IPR011060
- ProDom:   PD011184 [H]

Pfam domain/function: PF03437 BtpA [H]

EC number: NA

Molecular weight: Translated: 28860; Mature: 28728

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATVKEIFGKEKVIIGMVHFPPLPGSPLYDDKKGVEFIVERIKSDLKSLQNGGIDAVMFC
CCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEE
NENDRPYKLKVDSATVATMSRAIGEVMDEIRVPFGVDVLWDPFAAIAIAKAVGAKFIREI
CCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ITGTYVSDMGLWKTEVGEFYRYRKLLDANDIAVFFNISAEFAYNLDRRPLEEIAKSVAFS
HHCHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEECHHHEECCCCCHHHHHHHHHHHH
SLADVILVSGPMTGESPSLDHIKKVKDKVGEKPVFANTGVTKENVREILNIADGAIIGTS
HHHHHHEECCCCCCCCCCHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHCCCEEECC
LKKDGITRRFWNGSYFNSHR
HHHCCCCEEECCCCCCCCCC
>Mature Secondary Structure 
ATVKEIFGKEKVIIGMVHFPPLPGSPLYDDKKGVEFIVERIKSDLKSLQNGGIDAVMFC
CCHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEE
NENDRPYKLKVDSATVATMSRAIGEVMDEIRVPFGVDVLWDPFAAIAIAKAVGAKFIREI
CCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ITGTYVSDMGLWKTEVGEFYRYRKLLDANDIAVFFNISAEFAYNLDRRPLEEIAKSVAFS
HHCHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEECHHHEECCCCCHHHHHHHHHHHH
SLADVILVSGPMTGESPSLDHIKKVKDKVGEKPVFANTGVTKENVREILNIADGAIIGTS
HHHHHHEECCCCCCCCCCHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHCCCEEECC
LKKDGITRRFWNGSYFNSHR
HHHCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]