Definition | Eubacterium rectale ATCC 33656, complete genome. |
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Accession | NC_012781 |
Length | 3,449,685 |
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The map label for this gene is 238925573
Identifier: 238925573
GI number: 238925573
Start: 3071525
End: 3072346
Strand: Reverse
Name: 238925573
Synonym: EUBREC_3229
Alternate gene names: NA
Gene position: 3072346-3071525 (Counterclockwise)
Preceding gene: 238925574
Following gene: 238925572
Centisome position: 89.06
GC content: 32.6
Gene sequence:
>822_bases ATGGCAATAATTAATTTAACATGTGAACATTGTGGAGGAAATATTGTATTAGATGATTCTCATGAAATAGGAACATGTGA AAATTGCTTTTCGCAGTTTATTGTAAAAGAGGATAAAGTTACTCAGGAGATTGTACAAAATATAACAAAATATGTTTATG GATATGAAGGAAAAGATGTTGAGGAATTACTACTAGATGGTTATAAACTTTTGGATTTAGGCAATAATATTGATGCAAAT AAAAAATTTAGAAAGGCAATAGACATTGACCCTGATTGTTGGAGTGCATGGCTAGGGTATGCAGAAACAGGGGGAAGAAA AGGAACGATAACCTCGGTGGTTAATGCTTATGCAAATACATATAATGTTGCAGAAACAGAACAACAGCAATTGGAAACGT ATGTGAGTATGTTACAGTATATACCAGAGCAAAAATTACGCGCAGTTTTTGTACGTGCATATAATATGGCATCAAAAAGA GATAGATATGAAATTTTTAAGTTGGTATTGGGGGTTATAGGATGTGATGATTCAGAGATTACACGTTTGGCAGTTGACCT TAGTCCCAATGATTGGCGTGCATATTATGTTATGGGAAAATTTAGAATAATTAGAGTTAAGTGGTGCGAATTAGAGGGAA ATTTTTTTACAGGAAAGCATTTGCCACAATATGCATTAGAAGTTTTAGAAATATTTAGAAAAGCTTACAAACTTGCAAAA AATGAGAACGCTGAAGCTGAAATGCTAAGCTACTTTGATGAGATGGAAAAACAAGGTTCATATGCAGTGTTTATAGGAGA ATTAAAAAAGAATTTAGGATAA
Upstream 100 bases:
>100_bases TTTAAAAGCTATAAACAGAGGTTATAGACAGCAATAATACAAGGAATATTAAAAGGATGAGAATTATTTACTCGTCCTTT TTATATAGGGAGAAATATAT
Downstream 100 bases:
>100_bases AGGTGAGACAGTGCAGATAGTTGATATTATTAAGTATGATGGAAATGACAATAATAAGCAATGGTTGATATACAAATATC CATCAGATGAATTTGTGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MAIINLTCEHCGGNIVLDDSHEIGTCENCFSQFIVKEDKVTQEIVQNITKYVYGYEGKDVEELLLDGYKLLDLGNNIDAN KKFRKAIDIDPDCWSAWLGYAETGGRKGTITSVVNAYANTYNVAETEQQQLETYVSMLQYIPEQKLRAVFVRAYNMASKR DRYEIFKLVLGVIGCDDSEITRLAVDLSPNDWRAYYVMGKFRIIRVKWCELEGNFFTGKHLPQYALEVLEIFRKAYKLAK NENAEAEMLSYFDEMEKQGSYAVFIGELKKNLG
Sequences:
>Translated_273_residues MAIINLTCEHCGGNIVLDDSHEIGTCENCFSQFIVKEDKVTQEIVQNITKYVYGYEGKDVEELLLDGYKLLDLGNNIDAN KKFRKAIDIDPDCWSAWLGYAETGGRKGTITSVVNAYANTYNVAETEQQQLETYVSMLQYIPEQKLRAVFVRAYNMASKR DRYEIFKLVLGVIGCDDSEITRLAVDLSPNDWRAYYVMGKFRIIRVKWCELEGNFFTGKHLPQYALEVLEIFRKAYKLAK NENAEAEMLSYFDEMEKQGSYAVFIGELKKNLG >Mature_272_residues AIINLTCEHCGGNIVLDDSHEIGTCENCFSQFIVKEDKVTQEIVQNITKYVYGYEGKDVEELLLDGYKLLDLGNNIDANK KFRKAIDIDPDCWSAWLGYAETGGRKGTITSVVNAYANTYNVAETEQQQLETYVSMLQYIPEQKLRAVFVRAYNMASKRD RYEIFKLVLGVIGCDDSEITRLAVDLSPNDWRAYYVMGKFRIIRVKWCELEGNFFTGKHLPQYALEVLEIFRKAYKLAKN ENAEAEMLSYFDEMEKQGSYAVFIGELKKNLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31319; Mature: 31188
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIINLTCEHCGGNIVLDDSHEIGTCENCFSQFIVKEDKVTQEIVQNITKYVYGYEGKDV CEEEEEEHHHCCCEEEEECCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCH EELLLDGYKLLDLGNNIDANKKFRKAIDIDPDCWSAWLGYAETGGRKGTITSVVNAYANT HHHHHCCCCEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH YNVAETEQQQLETYVSMLQYIPEQKLRAVFVRAYNMASKRDRYEIFKLVLGVIGCDDSEI CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE TRLAVDLSPNDWRAYYVMGKFRIIRVKWCELEGNFFTGKHLPQYALEVLEIFRKAYKLAK EEEEEEECCCCCEEEEEEEEEEEEEEEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHC NENAEAEMLSYFDEMEKQGSYAVFIGELKKNLG CCCCHHHHHHHHHHHHHCCCEEEEEEHHHHHCC >Mature Secondary Structure AIINLTCEHCGGNIVLDDSHEIGTCENCFSQFIVKEDKVTQEIVQNITKYVYGYEGKDV EEEEEEHHHCCCEEEEECCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCH EELLLDGYKLLDLGNNIDANKKFRKAIDIDPDCWSAWLGYAETGGRKGTITSVVNAYANT HHHHHCCCCEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH YNVAETEQQQLETYVSMLQYIPEQKLRAVFVRAYNMASKRDRYEIFKLVLGVIGCDDSEI CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE TRLAVDLSPNDWRAYYVMGKFRIIRVKWCELEGNFFTGKHLPQYALEVLEIFRKAYKLAK EEEEEEECCCCCEEEEEEEEEEEEEEEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHC NENAEAEMLSYFDEMEKQGSYAVFIGELKKNLG CCCCHHHHHHHHHHHHHCCCEEEEEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA