Definition | Eubacterium rectale ATCC 33656, complete genome. |
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Accession | NC_012781 |
Length | 3,449,685 |
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The map label for this gene is 238925574
Identifier: 238925574
GI number: 238925574
Start: 3072410
End: 3072850
Strand: Reverse
Name: 238925574
Synonym: EUBREC_3230
Alternate gene names: NA
Gene position: 3072850-3072410 (Counterclockwise)
Preceding gene: 238925575
Following gene: 238925573
Centisome position: 89.08
GC content: 34.69
Gene sequence:
>441_bases ATGGGATTATTAGCACAGGAAAGAGCGGTAGATAGTAAAAGTTATCTTTTTGATGGTTCTGGTGGCATGAGAGATCAATT GGAACAGGCAATATTGAATGAATTGGAAAAAAAGAAGTATCCGTTAAAAACGAAGCTTGCTAATGTTAAATCAGGGGGCG TGATTTTTGGAACAAAAGAGCAATGTGTTGTTATTGATTGTGGCGGTAATACTAGAATTGTTATAGCTAATACTACGGTA GGAACTTATTTATATGTGCAGATATATTTGTTAATTCCATTTTCAAGTATTAACGGAGCATCATTGGCTAATGAACCAAT TAATGATATTTTTAAGAGACAACAGCGAGATGCTGTTTTTGCAGCTGCAGTTGATTCGGTAGAATGTGCATTTTCCGAAT TGGGTTTAAAAGCTATAAACAGAGGTTATAGACAGCAATAA
Upstream 100 bases:
>100_bases TAAAAGGCAATAGAATAGAACAACTTATAGGTTGTAAAATATTGATGAATATAGTATTATATACATGTAATTGTTAAATA AAATATAGAGAGGTAGTTGT
Downstream 100 bases:
>100_bases TACAAGGAATATTAAAAGGATGAGAATTATTTACTCGTCCTTTTTATATAGGGAGAAATATATATGGCAATAATTAATTT AACATGTGAACATTGTGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MGLLAQERAVDSKSYLFDGSGGMRDQLEQAILNELEKKKYPLKTKLANVKSGGVIFGTKEQCVVIDCGGNTRIVIANTTV GTYLYVQIYLLIPFSSINGASLANEPINDIFKRQQRDAVFAAAVDSVECAFSELGLKAINRGYRQQ
Sequences:
>Translated_146_residues MGLLAQERAVDSKSYLFDGSGGMRDQLEQAILNELEKKKYPLKTKLANVKSGGVIFGTKEQCVVIDCGGNTRIVIANTTV GTYLYVQIYLLIPFSSINGASLANEPINDIFKRQQRDAVFAAAVDSVECAFSELGLKAINRGYRQQ >Mature_145_residues GLLAQERAVDSKSYLFDGSGGMRDQLEQAILNELEKKKYPLKTKLANVKSGGVIFGTKEQCVVIDCGGNTRIVIANTTVG TYLYVQIYLLIPFSSINGASLANEPINDIFKRQQRDAVFAAAVDSVECAFSELGLKAINRGYRQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15999; Mature: 15867
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLLAQERAVDSKSYLFDGSGGMRDQLEQAILNELEKKKYPLKTKLANVKSGGVIFGTKE CCCCCCHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCEEEECCC QCVVIDCGGNTRIVIANTTVGTYLYVQIYLLIPFSSINGASLANEPINDIFKRQQRDAVF CEEEEECCCCEEEEEECCCHHHHHEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH AAAVDSVECAFSELGLKAINRGYRQQ HHHHHHHHHHHHHHCHHHHHHCCCCC >Mature Secondary Structure GLLAQERAVDSKSYLFDGSGGMRDQLEQAILNELEKKKYPLKTKLANVKSGGVIFGTKE CCCCCHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCEEEECCC QCVVIDCGGNTRIVIANTTVGTYLYVQIYLLIPFSSINGASLANEPINDIFKRQQRDAVF CEEEEECCCCEEEEEECCCHHHHHEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH AAAVDSVECAFSELGLKAINRGYRQQ HHHHHHHHHHHHHHCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA