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The map label for this gene is 238925572

Identifier: 238925572

GI number: 238925572

Start: 3070702

End: 3071514

Strand: Reverse

Name: 238925572

Synonym: EUBREC_3228

Alternate gene names: NA

Gene position: 3071514-3070702 (Counterclockwise)

Preceding gene: 238925573

Following gene: 238925571

Centisome position: 89.04

GC content: 29.64

Gene sequence:

>813_bases
GTGCAGATAGTTGATATTATTAAGTATGATGGAAATGACAATAATAAGCAATGGTTGATATACAAATATCCATCAGATGA
ATTTGTGTTAGGATCACAACTTATAGTTAACCAAGGTCAGGAAGCTTTATTTTTTAGAGGCGGTCAAGCATTGGATTTAT
TTGGGGCGGGGACGCATACGTTATCTACTGCAAATTTACCATTGCTCAATAATTTTGTGAAAATATTATTTGGGGGAAAG
ACTCCGTTTACGGCAGAGGTTTATTTTATAAATAAAACTGTGAATCTTAATATGAAATGGGGAACTTCTACACAAATTCC
AATAGAAGATTCAAAATATGGTTTAATTTTGAATATAATGGCGCGTGGTCAATATGGAATAATAATAAAAGATTCAAAAT
TATTTGTTTCAAGGATTATCGGAGCAATACCATTGGGAACACAAAAAGATTTTTTGTTAATTTCAAGATATTTTAATACT
ATGATTAATACAAAGGTTAAGTCAGTTATTTCAAATTTCATGATTTCTAACAGAATATCATTTTTAGAAATTTCTCAATA
CTTATATGAGTTGTCAGAGGTATTTAAGACACAGATAGAGATGGAGTTTGAGAGATTTGGGATAGAATTATTAAACTTTT
ATTGTGAAGCAATTGGACCTCACCCAAATGAATATCAGAAGCTCAAACAGTTTAAAGAGGAAAAACTGTTTCAAAACAAT
ACAAGTGATTTTATATTAAAAAAATGTCCAATATGTGGAAAAGAAAACAGTAATAATTTGAATTTTTGTGGTTACTGTGG
CAATAGGTTATAG

Upstream 100 bases:

>100_bases
GAAGCTGAAATGCTAAGCTACTTTGATGAGATGGAAAAACAAGGTTCATATGCAGTGTTTATAGGAGAATTAAAAAAGAA
TTTAGGATAAAGGTGAGACA

Downstream 100 bases:

>100_bases
GAAATAAATGAAAAAAGAGAATAGTAAAAAGACAATTATATTTAGCATATTGCTAACTATTGATTTTGTAATTGGAATTA
TTGGATATTACAAGATGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Band 7 Protein; Virion Core Protein-Like Protein; Transmembrane Protein; Zinc Finger RanBP2-Type; Antifreeze Protein; Membrane Protease Family Stomatin/Prohibitin-Like Protein; SPFH Domain/Band 7 Family; Virion Core Protein

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MQIVDIIKYDGNDNNKQWLIYKYPSDEFVLGSQLIVNQGQEALFFRGGQALDLFGAGTHTLSTANLPLLNNFVKILFGGK
TPFTAEVYFINKTVNLNMKWGTSTQIPIEDSKYGLILNIMARGQYGIIIKDSKLFVSRIIGAIPLGTQKDFLLISRYFNT
MINTKVKSVISNFMISNRISFLEISQYLYELSEVFKTQIEMEFERFGIELLNFYCEAIGPHPNEYQKLKQFKEEKLFQNN
TSDFILKKCPICGKENSNNLNFCGYCGNRL

Sequences:

>Translated_270_residues
MQIVDIIKYDGNDNNKQWLIYKYPSDEFVLGSQLIVNQGQEALFFRGGQALDLFGAGTHTLSTANLPLLNNFVKILFGGK
TPFTAEVYFINKTVNLNMKWGTSTQIPIEDSKYGLILNIMARGQYGIIIKDSKLFVSRIIGAIPLGTQKDFLLISRYFNT
MINTKVKSVISNFMISNRISFLEISQYLYELSEVFKTQIEMEFERFGIELLNFYCEAIGPHPNEYQKLKQFKEEKLFQNN
TSDFILKKCPICGKENSNNLNFCGYCGNRL
>Mature_270_residues
MQIVDIIKYDGNDNNKQWLIYKYPSDEFVLGSQLIVNQGQEALFFRGGQALDLFGAGTHTLSTANLPLLNNFVKILFGGK
TPFTAEVYFINKTVNLNMKWGTSTQIPIEDSKYGLILNIMARGQYGIIIKDSKLFVSRIIGAIPLGTQKDFLLISRYFNT
MINTKVKSVISNFMISNRISFLEISQYLYELSEVFKTQIEMEFERFGIELLNFYCEAIGPHPNEYQKLKQFKEEKLFQNN
TSDFILKKCPICGKENSNNLNFCGYCGNRL

Specific function: Unknown

COG id: COG4260

COG function: function code S; Putative virion core protein (lumpy skin disease virus)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30958; Mature: 30958

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIVDIIKYDGNDNNKQWLIYKYPSDEFVLGSQLIVNQGQEALFFRGGQALDLFGAGTHT
CCEEEEEEECCCCCCCEEEEEECCCCCEEECCHHEECCCCEEEEEECCCEEEEECCCCCE
LSTANLPLLNNFVKILFGGKTPFTAEVYFINKTVNLNMKWGTSTQIPIEDSKYGLILNIM
EECCCCHHHHHHHHHEECCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEE
ARGQYGIIIKDSKLFVSRIIGAIPLGTQKDFLLISRYFNTMINTKVKSVISNFMISNRIS
ECCCEEEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
FLEISQYLYELSEVFKTQIEMEFERFGIELLNFYCEAIGPHPNEYQKLKQFKEEKLFQNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
TSDFILKKCPICGKENSNNLNFCGYCGNRL
CCCCHHCCCCCCCCCCCCCCEEEEECCCCC
>Mature Secondary Structure
MQIVDIIKYDGNDNNKQWLIYKYPSDEFVLGSQLIVNQGQEALFFRGGQALDLFGAGTHT
CCEEEEEEECCCCCCCEEEEEECCCCCEEECCHHEECCCCEEEEEECCCEEEEECCCCCE
LSTANLPLLNNFVKILFGGKTPFTAEVYFINKTVNLNMKWGTSTQIPIEDSKYGLILNIM
EECCCCHHHHHHHHHEECCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEE
ARGQYGIIIKDSKLFVSRIIGAIPLGTQKDFLLISRYFNTMINTKVKSVISNFMISNRIS
ECCCEEEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
FLEISQYLYELSEVFKTQIEMEFERFGIELLNFYCEAIGPHPNEYQKLKQFKEEKLFQNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
TSDFILKKCPICGKENSNNLNFCGYCGNRL
CCCCHHCCCCCCCCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA