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The map label for this gene is 238925429

Identifier: 238925429

GI number: 238925429

Start: 2949139

End: 2949789

Strand: Reverse

Name: 238925429

Synonym: EUBREC_3084

Alternate gene names: NA

Gene position: 2949789-2949139 (Counterclockwise)

Preceding gene: 238925430

Following gene: 238925428

Centisome position: 85.51

GC content: 42.09

Gene sequence:

>651_bases
ATGAGAAATAAAAGAGTATGTGATTATATAGCGGAAGCTATTCAGAATGAAATTTTATCAGGACGTATGTCATCAGGAGT
GCCATTGCGTCAGGAAGAGCTTGCGGATAGTCTCGGTTATTCGAGAATACCAATCAGGGAGGCATTGCAGATACTTGAGT
CGCAGGGATTGGCAAAGAGACTGGCAACAAGGCATGTGGTGGTGGCTGATTTTTCGGACGAGGTGATAACGGAAATCTAT
GAGCTGCTTTCAGATGTGGAGATAAAACTGTTAAAGGGCATGCTGCAGTCTGGTATATGTTTGTGGGATAAAGCGGTCAG
TGATAACAGTGAGCAGCCCAATTGCGTACATGAGCCATCTGCTATAAATGAAAAATTGTCTGCAGAGCTGCAGTTTCATG
AGACAATTATATCCAATAGTCATAACGAGTATTTTACACATATTCTTGAAAATGGTCTTTGGTGCTATATCAGGTTTGCG
GTTGAAGAGACGGCAGCAGGCAGGGAAAATGTGCGAAGACTTGAGCTGTTATCGAAAATAGCAGAGGCATATTCGGATAA
GGATATAAATATTGTCAGAGAACTGTTGGGAGAATATTTTGGAAGTCTTTGTGAGGCTGTTATAGCAGAGAGGGAAGAAA
GCAGCAGGTAA

Upstream 100 bases:

>100_bases
ATAGGGTTTGATCTGGATTATGCGGATGTGAGAGATTAGGATAAATCGGTGTAATAAGTTTGACTGGAAATTGTATCCAA
AATCAGATATAATATATATT

Downstream 100 bases:

>100_bases
TTGGTGACTTATTTTATACTGAATAATGACAGATGATTCGGAAGCATATAAAATTAAAAGATAACAAGAGGAAAAAGTAA
TTATGATAGGACTTAAACCG

Product: putative transcription regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator GntR Family Protein; GntR-Family Transcriptional Regulator; Transcription Regulator; Transcriptional Regulator; Regulator PutR For Proline Utilization GntR Family

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MRNKRVCDYIAEAIQNEILSGRMSSGVPLRQEELADSLGYSRIPIREALQILESQGLAKRLATRHVVVADFSDEVITEIY
ELLSDVEIKLLKGMLQSGICLWDKAVSDNSEQPNCVHEPSAINEKLSAELQFHETIISNSHNEYFTHILENGLWCYIRFA
VEETAAGRENVRRLELLSKIAEAYSDKDINIVRELLGEYFGSLCEAVIAEREESSR

Sequences:

>Translated_216_residues
MRNKRVCDYIAEAIQNEILSGRMSSGVPLRQEELADSLGYSRIPIREALQILESQGLAKRLATRHVVVADFSDEVITEIY
ELLSDVEIKLLKGMLQSGICLWDKAVSDNSEQPNCVHEPSAINEKLSAELQFHETIISNSHNEYFTHILENGLWCYIRFA
VEETAAGRENVRRLELLSKIAEAYSDKDINIVRELLGEYFGSLCEAVIAEREESSR
>Mature_216_residues
MRNKRVCDYIAEAIQNEILSGRMSSGVPLRQEELADSLGYSRIPIREALQILESQGLAKRLATRHVVVADFSDEVITEIY
ELLSDVEIKLLKGMLQSGICLWDKAVSDNSEQPNCVHEPSAINEKLSAELQFHETIISNSHNEYFTHILENGLWCYIRFA
VEETAAGRENVRRLELLSKIAEAYSDKDINIVRELLGEYFGSLCEAVIAEREESSR

Specific function: Unknown

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24490; Mature: 24490

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNKRVCDYIAEAIQNEILSGRMSSGVPLRQEELADSLGYSRIPIREALQILESQGLAKR
CCCCHHHHHHHHHHHHHHHHCHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCHHHH
LATRHVVVADFSDEVITEIYELLSDVEIKLLKGMLQSGICLWDKAVSDNSEQPNCVHEPS
HHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCH
AINEKLSAELQFHETIISNSHNEYFTHILENGLWCYIRFAVEETAAGRENVRRLELLSKI
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEHHHHHHHHCCHHHHHHHHHHHHH
AEAYSDKDINIVRELLGEYFGSLCEAVIAEREESSR
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRNKRVCDYIAEAIQNEILSGRMSSGVPLRQEELADSLGYSRIPIREALQILESQGLAKR
CCCCHHHHHHHHHHHHHHHHCHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCHHHH
LATRHVVVADFSDEVITEIYELLSDVEIKLLKGMLQSGICLWDKAVSDNSEQPNCVHEPS
HHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCH
AINEKLSAELQFHETIISNSHNEYFTHILENGLWCYIRFAVEETAAGRENVRRLELLSKI
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEHHHHHHHHCCHHHHHHHHHHHHH
AEAYSDKDINIVRELLGEYFGSLCEAVIAEREESSR
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA