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The map label for this gene is 238925227

Identifier: 238925227

GI number: 238925227

Start: 2759655

End: 2760575

Strand: Reverse

Name: 238925227

Synonym: EUBREC_2881

Alternate gene names: NA

Gene position: 2760575-2759655 (Counterclockwise)

Preceding gene: 238925228

Following gene: 238925226

Centisome position: 80.02

GC content: 44.52

Gene sequence:

>921_bases
ATGAAACTTGGGTTTATCACATCCATCCTTGACAGCTGGACCTATGAAGAAATGATGGACTTTGCATCCGGACAGGGATT
TGAATGTGTGGAAGTGGCATGCTGGCCACAGGAAAAAGCAGAAAGAAGATATGCAGGGGTAAGCCATATTGATGCAGAAC
GGGTTAACCAGGATGACGCATATGCAGAGCATATTGTAGAATATGCTAAAAAATCAGGAGTGGAGATATCGGCACTGGCC
TATTATCCAAACGTGATGGTGGCAGATAAAGAGAAAAGCGCAACCGCTGTGGAACACCTGAAACAGGTGATTCTTGCAAG
TAAAAAATTAGGTGTGGGCATGGTCACGACATTTATCGGAAGGGACCAGACCAAAAATATACAGGAAAATCTGGAACTGG
TAAAAGAGATATGGCCACCTATCATAAAACTGGCAGAGGAATGTGACGTGAAGATCGCCATCGAGAACTGTCCGATGCTT
TTTGGCAAGGAACAGTGGCCGGGAGGACAGAACCTGATGACAACACCGCCAATCTGGAGAGAAGTATTCCGGATCCTGGA
CAGTGACCATCTGGGCATCAACTATGATCCATCCCACTTTATCTGGCAGATGATCGATTATATCCGCCCGCTTTACGAAT
TCAAGGATAAGATCTTCCATGTCCATTACAAGGATATAAAGATATATAAAGACAAGCTGGAATCCTGCGGCATCATGGCA
TATCCTCTGGAATATATGTCACCGAAAATCCCTGGACTTGGAGATGTGGACTGGGGAAAATATGTGTCAGCGCTTACAGA
CATCGGATATGATGGCTATACCTGTATCGAGATCGAGGATAAGGCTTTTGAGGATTTCAAGGAGAAGGTTGAGAATTCCT
TGATCATCAGCAAGAGATATCTGGAACAGTACGTGATTTAG

Upstream 100 bases:

>100_bases
TGAACTATCTGAAATGGTGCAGAGGCGGAGAGTTCACACCAACTCCATGGGAGAAATAACAAAGATATAACAGAGACAGA
AGAAACAGGAGGGTATTTCT

Downstream 100 bases:

>100_bases
TAAAGGAGATAATACCATGAGAAAATTAAAAGCAGGAATCGTAGGATGCGGAGGAATCGCCAACGGAAAACACCTTCCAG
CTATGAAAAAAAGTGGTCTT

Product: AP-endonuclease/AP-lyase

Products: NA

Alternate protein names: Xylose Isomerase Domain-Containing Protein; Sugar Phosphate Isomerase/Epimerase; Xylose Isomerase-Like Protein; AP-Endonuclease/AP-Lyase; Xylose Isomerase-Like TIM Barrel; AP Endonuclease; Xylose Isomerase DomaiN-Containing Protein Tim Barrel; Xylose Isomerase Domain-Containing Protein TIM Barrel; Isomerase/Epimerase; Xylose Isomerase Domain Protein; Xylose Isomerase-Like; Endonuclease; Xlose Isomerase Domain-Containing Protein

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MKLGFITSILDSWTYEEMMDFASGQGFECVEVACWPQEKAERRYAGVSHIDAERVNQDDAYAEHIVEYAKKSGVEISALA
YYPNVMVADKEKSATAVEHLKQVILASKKLGVGMVTTFIGRDQTKNIQENLELVKEIWPPIIKLAEECDVKIAIENCPML
FGKEQWPGGQNLMTTPPIWREVFRILDSDHLGINYDPSHFIWQMIDYIRPLYEFKDKIFHVHYKDIKIYKDKLESCGIMA
YPLEYMSPKIPGLGDVDWGKYVSALTDIGYDGYTCIEIEDKAFEDFKEKVENSLIISKRYLEQYVI

Sequences:

>Translated_306_residues
MKLGFITSILDSWTYEEMMDFASGQGFECVEVACWPQEKAERRYAGVSHIDAERVNQDDAYAEHIVEYAKKSGVEISALA
YYPNVMVADKEKSATAVEHLKQVILASKKLGVGMVTTFIGRDQTKNIQENLELVKEIWPPIIKLAEECDVKIAIENCPML
FGKEQWPGGQNLMTTPPIWREVFRILDSDHLGINYDPSHFIWQMIDYIRPLYEFKDKIFHVHYKDIKIYKDKLESCGIMA
YPLEYMSPKIPGLGDVDWGKYVSALTDIGYDGYTCIEIEDKAFEDFKEKVENSLIISKRYLEQYVI
>Mature_306_residues
MKLGFITSILDSWTYEEMMDFASGQGFECVEVACWPQEKAERRYAGVSHIDAERVNQDDAYAEHIVEYAKKSGVEISALA
YYPNVMVADKEKSATAVEHLKQVILASKKLGVGMVTTFIGRDQTKNIQENLELVKEIWPPIIKLAEECDVKIAIENCPML
FGKEQWPGGQNLMTTPPIWREVFRILDSDHLGINYDPSHFIWQMIDYIRPLYEFKDKIFHVHYKDIKIYKDKLESCGIMA
YPLEYMSPKIPGLGDVDWGKYVSALTDIGYDGYTCIEIEDKAFEDFKEKVENSLIISKRYLEQYVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35304; Mature: 35304

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLGFITSILDSWTYEEMMDFASGQGFECVEVACWPQEKAERRYAGVSHIDAERVNQDDA
CCCHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEECCHHHHHHHHCCCCCCCHHHCCCHHH
YAEHIVEYAKKSGVEISALAYYPNVMVADKEKSATAVEHLKQVILASKKLGVGMVTTFIG
HHHHHHHHHHHCCCEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
RDQTKNIQENLELVKEIWPPIIKLAEECDVKIAIENCPMLFGKEQWPGGQNLMTTPPIWR
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEECCCCCCCCCCCCCCCHHHH
EVFRILDSDHLGINYDPSHFIWQMIDYIRPLYEFKDKIFHVHYKDIKIYKDKLESCGIMA
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHCCEEE
YPLEYMSPKIPGLGDVDWGKYVSALTDIGYDGYTCIEIEDKAFEDFKEKVENSLIISKRY
ECHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHH
LEQYVI
HHHHCC
>Mature Secondary Structure
MKLGFITSILDSWTYEEMMDFASGQGFECVEVACWPQEKAERRYAGVSHIDAERVNQDDA
CCCHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEECCHHHHHHHHCCCCCCCHHHCCCHHH
YAEHIVEYAKKSGVEISALAYYPNVMVADKEKSATAVEHLKQVILASKKLGVGMVTTFIG
HHHHHHHHHHHCCCEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
RDQTKNIQENLELVKEIWPPIIKLAEECDVKIAIENCPMLFGKEQWPGGQNLMTTPPIWR
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEECCCCCCCCCCCCCCCHHHH
EVFRILDSDHLGINYDPSHFIWQMIDYIRPLYEFKDKIFHVHYKDIKIYKDKLESCGIMA
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHCCEEE
YPLEYMSPKIPGLGDVDWGKYVSALTDIGYDGYTCIEIEDKAFEDFKEKVENSLIISKRY
ECHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHH
LEQYVI
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA