Click here to switch to the map view.

The map label for this gene is 238925228

Identifier: 238925228

GI number: 238925228

Start: 2760617

End: 2761525

Strand: Reverse

Name: 238925228

Synonym: EUBREC_2882

Alternate gene names: NA

Gene position: 2761525-2760617 (Counterclockwise)

Preceding gene: 238925229

Following gene: 238925227

Centisome position: 80.05

GC content: 45.87

Gene sequence:

>909_bases
GTGCATGTAACAGAACAGGAGGAAATAAGTATGAAACAGATCAAAATCGGAACCTGCGTACCAGGCCCCGTAGCAGAAGA
ATGGTTGAAAGGATTTGTTGGAAAAGGTTTCGAAACATTTTCCCTCAATTTCCATATGTCACTGGAAGGAACAGATCTTG
ATAAACTGGCCCTGAGCACAGAACAGATTCTTGCCGGTACAGATTCAAAGATCACTACACTCGGATACTACTGTAATCCA
ATCCAGTATCCAGAGCACAGAAAGACATTGGAAAAGGTAATTTGCACTGCTGAAAAATTCGGAGCTACCCATGTAAGCAC
CTTTGCAGGAGCCTGGGAAGGAAAACCGGTAGAATCCGCATACGAAGAGTTCGGAAAAGTGTTCCGTGAACTGGCAGAAC
TTGCAGAAGAAAAGGGCGTAAAGCTGGGTATCGAAAACTGTCTTATGGATGGAACCTGGGAACATGCCACCTGCAACATC
GGTTTCAACCCGAAAGCCTGGGAAGTCATGTTTGAGGAAGTAAAGAATGATAACTTCGGACTTGAATGGGAGCCGACCCA
CCAGATGGTACAGTTGATCGATCCTGTGACAGAGCTGAGAAAATGGTGCAAAAAGATAGTCCATGTACATGGAAAAGATG
CGACCATTGACTGGGATGCAGTAAGGCACGGCGGTATCTCCGGAGCAGTTCCTTTTGTATGGCATCGTATGCCGGGATTT
GGTGACACAAACTGGAGAGATATCATTTCTATCTTAAGAAGCAACGGATATGAGGACGATATCTGTATCGAAGGATATCA
CGATCCGGTATACCGGGGAGAACTGGAGATGACAGGACAGCTTCACGCACTGAACTATCTGAAATGGTGCAGAGGCGGAG
AGTTCACACCAACTCCATGGGAGAAATAA

Upstream 100 bases:

>100_bases
AGACAAAACAGGTAATCGAATTTCAGGACCAGGTGTAACAGGAAAGGCATTGAGTAGTTATAACATAAAAATAAAAGACA
GTTGTACATGTTCTTTGAGA

Downstream 100 bases:

>100_bases
CAAAGATATAACAGAGACAGAAGAAACAGGAGGGTATTTCTATGAAACTTGGGTTTATCACATCCATCCTTGACAGCTGG
ACCTATGAAGAAATGATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Xylose Isomerase Domain-Containing Protein; Sugar Phosphate Isomerase/Epimerase; Xylose Isomerase DomaiN-Containing Protein Tim Barrel; Isomerase/Epimerase; Xylose Isomerase Domain Protein; Xylose Isomerase-Like; AP-Endonuclease/AP-Lyase

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MHVTEQEEISMKQIKIGTCVPGPVAEEWLKGFVGKGFETFSLNFHMSLEGTDLDKLALSTEQILAGTDSKITTLGYYCNP
IQYPEHRKTLEKVICTAEKFGATHVSTFAGAWEGKPVESAYEEFGKVFRELAELAEEKGVKLGIENCLMDGTWEHATCNI
GFNPKAWEVMFEEVKNDNFGLEWEPTHQMVQLIDPVTELRKWCKKIVHVHGKDATIDWDAVRHGGISGAVPFVWHRMPGF
GDTNWRDIISILRSNGYEDDICIEGYHDPVYRGELEMTGQLHALNYLKWCRGGEFTPTPWEK

Sequences:

>Translated_302_residues
MHVTEQEEISMKQIKIGTCVPGPVAEEWLKGFVGKGFETFSLNFHMSLEGTDLDKLALSTEQILAGTDSKITTLGYYCNP
IQYPEHRKTLEKVICTAEKFGATHVSTFAGAWEGKPVESAYEEFGKVFRELAELAEEKGVKLGIENCLMDGTWEHATCNI
GFNPKAWEVMFEEVKNDNFGLEWEPTHQMVQLIDPVTELRKWCKKIVHVHGKDATIDWDAVRHGGISGAVPFVWHRMPGF
GDTNWRDIISILRSNGYEDDICIEGYHDPVYRGELEMTGQLHALNYLKWCRGGEFTPTPWEK
>Mature_302_residues
MHVTEQEEISMKQIKIGTCVPGPVAEEWLKGFVGKGFETFSLNFHMSLEGTDLDKLALSTEQILAGTDSKITTLGYYCNP
IQYPEHRKTLEKVICTAEKFGATHVSTFAGAWEGKPVESAYEEFGKVFRELAELAEEKGVKLGIENCLMDGTWEHATCNI
GFNPKAWEVMFEEVKNDNFGLEWEPTHQMVQLIDPVTELRKWCKKIVHVHGKDATIDWDAVRHGGISGAVPFVWHRMPGF
GDTNWRDIISILRSNGYEDDICIEGYHDPVYRGELEMTGQLHALNYLKWCRGGEFTPTPWEK

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34305; Mature: 34305

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVTEQEEISMKQIKIGTCVPGPVAEEWLKGFVGKGFETFSLNFHMSLEGTDLDKLALST
CCCCCCHHCCHHHEEECCCCCCHHHHHHHHHHHCCCEEEEEEEEEEEECCCCHHHHHHHH
EQILAGTDSKITTLGYYCNPIQYPEHRKTLEKVICTAEKFGATHVSTFAGAWEGKPVESA
HHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHH
YEEFGKVFRELAELAEEKGVKLGIENCLMDGTWEHATCNIGFNPKAWEVMFEEVKNDNFG
HHHHHHHHHHHHHHHHHCCCEECHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCC
LEWEPTHQMVQLIDPVTELRKWCKKIVHVHGKDATIDWDAVRHGGISGAVPFVWHRMPGF
CEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHCCCCCCCHHHHHHCCCCC
GDTNWRDIISILRSNGYEDDICIEGYHDPVYRGELEMTGQLHALNYLKWCRGGEFTPTPW
CCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCC
EK
CC
>Mature Secondary Structure
MHVTEQEEISMKQIKIGTCVPGPVAEEWLKGFVGKGFETFSLNFHMSLEGTDLDKLALST
CCCCCCHHCCHHHEEECCCCCCHHHHHHHHHHHCCCEEEEEEEEEEEECCCCHHHHHHHH
EQILAGTDSKITTLGYYCNPIQYPEHRKTLEKVICTAEKFGATHVSTFAGAWEGKPVESA
HHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHH
YEEFGKVFRELAELAEEKGVKLGIENCLMDGTWEHATCNIGFNPKAWEVMFEEVKNDNFG
HHHHHHHHHHHHHHHHHCCCEECHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCC
LEWEPTHQMVQLIDPVTELRKWCKKIVHVHGKDATIDWDAVRHGGISGAVPFVWHRMPGF
CEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHCCCCCCCHHHHHHCCCCC
GDTNWRDIISILRSNGYEDDICIEGYHDPVYRGELEMTGQLHALNYLKWCRGGEFTPTPW
CCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCC
EK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA