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The map label for this gene is ycjS [H]

Identifier: 238925226

GI number: 238925226

Start: 2758562

End: 2759638

Strand: Reverse

Name: ycjS [H]

Synonym: EUBREC_2880

Alternate gene names: 238925226

Gene position: 2759638-2758562 (Counterclockwise)

Preceding gene: 238925227

Following gene: 238925225

Centisome position: 80.0

GC content: 44.66

Gene sequence:

>1077_bases
ATGAGAAAATTAAAAGCAGGAATCGTAGGATGCGGAGGAATCGCCAACGGAAAACACCTTCCAGCTATGAAAAAAAGTGG
TCTTTATGAGATTGTAGCTTTCTGTGACATCGTCAGGGAACGTGCAGAGAAAGCAAAGGAAGAATATGGCACAGAAGATG
CAAAAGTATTCGAAGACTATAAGGTGCTTATCAAAGAGGACCTGGATGTTGTATATGTAACTACACCGAACCGCTCCCAT
GCAGAAATCTCTATCGCAGCCATGGAAGCAGGAAAAGATGTTATGTGTGAAAAGCCAATGGCAAAGAATTATGCTGAGGC
ACAGAAAATGGTGGAGACTGCAGAGAAAACAGGTAGAGTCCTGAACATCGGATATCAGAACCGTTATCGTTCAGATTCCC
TGTACCTGAAAGAAATGTGCAAGGCGGATGAACTGGGAGAAATCTATTTTGCGAAAGCTCACGCACTCAGAAGAAGAGCA
GTTCCTACCTGGGGTGTATTCTTAAATGAGGAAGAACAGGGAGGCGGTCCACTGATCGATATCGGAACCCATGCATTGGA
TCTGACATTATGGATGATGGACAATTATGAAGTAGAGTCTGTAACAGGACAAACATTCCGCAAACTGGCTGATCAGACCA
ACCAGGGAAATGCTTTTGGCAACTGGGATCCTGAGGAGTTTTGCGTAGAAGATTCCGCTTTCGGATTCATCCGTATGAAA
AACGGTGCAGTGATTGAACTCGAAGCTGCCTGGGCACTGAACACACTGGAGGTTGATGAGGCCAAGACAAGTCTGTGCGG
AACAAAAGCCGGAGCAGATATGAAAGATGGCCTGCGAATCAACTACATCCATCACAATAAACAGGTAGTAGAGAAGCCAG
CATTATCCGGTGAAGGAGTAGCATTCTTCTCAGGAGAAGAAAAACCAGCAGGGGATTATGAACAGGAACTGTTCTACCAT
ATCGTTGCTGACGGAGCTGAGCAGATAGTAAAACCTGCACAGGCTGCAGTTGTTACCCGTGTACTGGAAGCAATCTATGA
GTCTGCAAAAAGTGGTAAGACAATTTATTTTGATTAA

Upstream 100 bases:

>100_bases
GATAAGGCTTTTGAGGATTTCAAGGAGAAGGTTGAGAATTCCTTGATCATCAGCAAGAGATATCTGGAACAGTACGTGAT
TTAGTAAAGGAGATAATACC

Downstream 100 bases:

>100_bases
AAGGCGATTTGACCTATACAGTTACAACAGTTCAAACATAAGGAGTAATCATGGAAATAAATAAATTACAGCAATTGCTG
TCAGAAATGTCTTTGCAGGA

Product: possible dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MRKLKAGIVGCGGIANGKHLPAMKKSGLYEIVAFCDIVRERAEKAKEEYGTEDAKVFEDYKVLIKEDLDVVYVTTPNRSH
AEISIAAMEAGKDVMCEKPMAKNYAEAQKMVETAEKTGRVLNIGYQNRYRSDSLYLKEMCKADELGEIYFAKAHALRRRA
VPTWGVFLNEEEQGGGPLIDIGTHALDLTLWMMDNYEVESVTGQTFRKLADQTNQGNAFGNWDPEEFCVEDSAFGFIRMK
NGAVIELEAAWALNTLEVDEAKTSLCGTKAGADMKDGLRINYIHHNKQVVEKPALSGEGVAFFSGEEKPAGDYEQELFYH
IVADGAEQIVKPAQAAVVTRVLEAIYESAKSGKTIYFD

Sequences:

>Translated_358_residues
MRKLKAGIVGCGGIANGKHLPAMKKSGLYEIVAFCDIVRERAEKAKEEYGTEDAKVFEDYKVLIKEDLDVVYVTTPNRSH
AEISIAAMEAGKDVMCEKPMAKNYAEAQKMVETAEKTGRVLNIGYQNRYRSDSLYLKEMCKADELGEIYFAKAHALRRRA
VPTWGVFLNEEEQGGGPLIDIGTHALDLTLWMMDNYEVESVTGQTFRKLADQTNQGNAFGNWDPEEFCVEDSAFGFIRMK
NGAVIELEAAWALNTLEVDEAKTSLCGTKAGADMKDGLRINYIHHNKQVVEKPALSGEGVAFFSGEEKPAGDYEQELFYH
IVADGAEQIVKPAQAAVVTRVLEAIYESAKSGKTIYFD
>Mature_358_residues
MRKLKAGIVGCGGIANGKHLPAMKKSGLYEIVAFCDIVRERAEKAKEEYGTEDAKVFEDYKVLIKEDLDVVYVTTPNRSH
AEISIAAMEAGKDVMCEKPMAKNYAEAQKMVETAEKTGRVLNIGYQNRYRSDSLYLKEMCKADELGEIYFAKAHALRRRA
VPTWGVFLNEEEQGGGPLIDIGTHALDLTLWMMDNYEVESVTGQTFRKLADQTNQGNAFGNWDPEEFCVEDSAFGFIRMK
NGAVIELEAAWALNTLEVDEAKTSLCGTKAGADMKDGLRINYIHHNKQVVEKPALSGEGVAFFSGEEKPAGDYEQELFYH
IVADGAEQIVKPAQAAVVTRVLEAIYESAKSGKTIYFD

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=355, Percent_Identity=36.6197183098592, Blast_Score=215, Evalue=3e-57,
Organism=Escherichia coli, GI87081947, Length=190, Percent_Identity=27.8947368421053, Blast_Score=79, Evalue=6e-16,
Organism=Drosophila melanogaster, GI24581117, Length=164, Percent_Identity=27.4390243902439, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 39742; Mature: 39742

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLKAGIVGCGGIANGKHLPAMKKSGLYEIVAFCDIVRERAEKAKEEYGTEDAKVFEDY
CCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
KVLIKEDLDVVYVTTPNRSHAEISIAAMEAGKDVMCEKPMAKNYAEAQKMVETAEKTGRV
HHHHHCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCHHCCHHHHHHHHHHHHHCCCE
LNIGYQNRYRSDSLYLKEMCKADELGEIYFAKAHALRRRAVPTWGVFLNEEEQGGGPLID
EEECCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEE
IGTHALDLTLWMMDNYEVESVTGQTFRKLADQTNQGNAFGNWDPEEFCVEDSAFGFIRMK
ECCCEEEEEEEEECCEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCEEEEEC
NGAVIELEAAWALNTLEVDEAKTSLCGTKAGADMKDGLRINYIHHNKQVVEKPALSGEGV
CCCEEEEEECEEECEEEHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHCCCCCCCCE
AFFSGEEKPAGDYEQELFYHIVADGAEQIVKPAQAAVVTRVLEAIYESAKSGKTIYFD
EEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
>Mature Secondary Structure
MRKLKAGIVGCGGIANGKHLPAMKKSGLYEIVAFCDIVRERAEKAKEEYGTEDAKVFEDY
CCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
KVLIKEDLDVVYVTTPNRSHAEISIAAMEAGKDVMCEKPMAKNYAEAQKMVETAEKTGRV
HHHHHCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCHHCCHHHHHHHHHHHHHCCCE
LNIGYQNRYRSDSLYLKEMCKADELGEIYFAKAHALRRRAVPTWGVFLNEEEQGGGPLID
EEECCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEE
IGTHALDLTLWMMDNYEVESVTGQTFRKLADQTNQGNAFGNWDPEEFCVEDSAFGFIRMK
ECCCEEEEEEEEECCEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCEEEEEC
NGAVIELEAAWALNTLEVDEAKTSLCGTKAGADMKDGLRINYIHHNKQVVEKPALSGEGV
CCCEEEEEECEEECEEEHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHCCCCCCCCE
AFFSGEEKPAGDYEQELFYHIVADGAEQIVKPAQAAVVTRVLEAIYESAKSGKTIYFD
EEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]