| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238924788
Identifier: 238924788
GI number: 238924788
Start: 2308875
End: 2310275
Strand: Direct
Name: 238924788
Synonym: EUBREC_2439
Alternate gene names: NA
Gene position: 2308875-2310275 (Clockwise)
Preceding gene: 238924787
Following gene: 238924789
Centisome position: 66.93
GC content: 38.54
Gene sequence:
>1401_bases ATGGAAATTATGATGTTTATTATCTTTATAATTACAAATCTTATTATCATACTATGTATGCAATTTGCGTACACACACGC CTATAAATATGAAAACGGCATGTATCTCAATGTACATATTCCATCATCTCACAAAGAAGATGCCGAAGTAACCGAAATCG TCACCACCGGAAAACGCAAAATGAAACACTTTCAAATTGCCAATGTGATTATCTCCATTGCGATATGCTTTATTGTTTTT TTTAACATTGCTGTTTTTGTTCTGGTATATATTATCTGGATGTTCGCATATATCTTTGGAATTATTCATATTCCAAACAG CTCCCACCGGAAAATGTATGCTCTGAAAATACAAAACGGATGGATAATAGAAACCCAACGTAAAAAGGTTTATATCGACA CCCGCGTTTCAGCAGAAGCCGGTGCCACGACAGTCAGCTATAAATGGCACGCACTCTTTTTAATTACTGAGCTTGCAGCA TATATACCATACTTTATGCTTGGTGACACCCATTACAATATCCTTATGATTTCGCTGTTTTTGTGCTCTGTTTTAATATC CACACTTTCGCTGGTATTTCATGCTTTTATAAACAAAAGCGAGCGCCACGTATACAGCATGGATTCAAAGCTCAACCTTA TTGTCAACAATACTATGAAGAAATATAAAAGCATCGCAATGCTTCTCCTAAGCGGGCTAAACGCCGTCGCATGGATTTAT GTAGCATTATACACAAGTATCACCGGAATACTTCCGGCATCATCATATTATGTGTATATTTTCATTCAGTTAATAGCCGT TTTGGGATTTATTGTTCCAATTTATATGGGCTTAAACAGAAAGAAGGAACTGCTGTCTGCCAACACCTCACCAATAGATG TGGACGATGATGAATACTGGAAAACCGGCTACTACTATAATCCCGACGACAAACATATTCTCATTGAAAACCGCATGCAG TCCGGCAATTACACGTTTAATTATGCTAAAAAAGGCGCGTGGATTTTCACAGGAATCACCTGTGCAATAACAGCCGGCTG TATCATCCTGGTGTTTGTCTGCATGCTTCCTTTGATTAATATACAGGAAAAAATCACTATGACAAACAATAACCTTACTA TTTCTGCCGGTGGATATACAAGCAAGATTGATGTAAATGACATCACAGAGCTTAAGCTTCTGGACGAGCTGCCGGATGAC AGTTTCCTGCGTACAAACGGAGCCTCTACCGACAGCTACGATATCGGAAGGTATGAAGGACGCACCCTTGGAAAATGCAG CCTGTATGTATTCGACGGATACTCTCCTATTCTCATGATAAAATCGGATGATACACTGGTGTTTGTAAATTCTAAGGAAG ATGGAGAGATAGAGGGGTTGTATGAAGAATTAAGTCAATAA
Upstream 100 bases:
>100_bases GGCCTGTCTCACCGGAATGAGCCGTGAGGAATTTTTATCAATGTGTGATAAACTGTATTCACAAATGAAACCATGTACCG CTTAGCAGAGGAGGCAGACT
Downstream 100 bases:
>100_bases ATTTGTTCTTTTTATGTTATACTGTAATCGTATACCTAAAAAGAAAGCAGGCAAAATCTATGAAAACACGACAAGAAGCA TTAGACTACGGCTTATCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 466; Mature: 466
Protein sequence:
>466_residues MEIMMFIIFIITNLIIILCMQFAYTHAYKYENGMYLNVHIPSSHKEDAEVTEIVTTGKRKMKHFQIANVIISIAICFIVF FNIAVFVLVYIIWMFAYIFGIIHIPNSSHRKMYALKIQNGWIIETQRKKVYIDTRVSAEAGATTVSYKWHALFLITELAA YIPYFMLGDTHYNILMISLFLCSVLISTLSLVFHAFINKSERHVYSMDSKLNLIVNNTMKKYKSIAMLLLSGLNAVAWIY VALYTSITGILPASSYYVYIFIQLIAVLGFIVPIYMGLNRKKELLSANTSPIDVDDDEYWKTGYYYNPDDKHILIENRMQ SGNYTFNYAKKGAWIFTGITCAITAGCIILVFVCMLPLINIQEKITMTNNNLTISAGGYTSKIDVNDITELKLLDELPDD SFLRTNGASTDSYDIGRYEGRTLGKCSLYVFDGYSPILMIKSDDTLVFVNSKEDGEIEGLYEELSQ
Sequences:
>Translated_466_residues MEIMMFIIFIITNLIIILCMQFAYTHAYKYENGMYLNVHIPSSHKEDAEVTEIVTTGKRKMKHFQIANVIISIAICFIVF FNIAVFVLVYIIWMFAYIFGIIHIPNSSHRKMYALKIQNGWIIETQRKKVYIDTRVSAEAGATTVSYKWHALFLITELAA YIPYFMLGDTHYNILMISLFLCSVLISTLSLVFHAFINKSERHVYSMDSKLNLIVNNTMKKYKSIAMLLLSGLNAVAWIY VALYTSITGILPASSYYVYIFIQLIAVLGFIVPIYMGLNRKKELLSANTSPIDVDDDEYWKTGYYYNPDDKHILIENRMQ SGNYTFNYAKKGAWIFTGITCAITAGCIILVFVCMLPLINIQEKITMTNNNLTISAGGYTSKIDVNDITELKLLDELPDD SFLRTNGASTDSYDIGRYEGRTLGKCSLYVFDGYSPILMIKSDDTLVFVNSKEDGEIEGLYEELSQ >Mature_466_residues MEIMMFIIFIITNLIIILCMQFAYTHAYKYENGMYLNVHIPSSHKEDAEVTEIVTTGKRKMKHFQIANVIISIAICFIVF FNIAVFVLVYIIWMFAYIFGIIHIPNSSHRKMYALKIQNGWIIETQRKKVYIDTRVSAEAGATTVSYKWHALFLITELAA YIPYFMLGDTHYNILMISLFLCSVLISTLSLVFHAFINKSERHVYSMDSKLNLIVNNTMKKYKSIAMLLLSGLNAVAWIY VALYTSITGILPASSYYVYIFIQLIAVLGFIVPIYMGLNRKKELLSANTSPIDVDDDEYWKTGYYYNPDDKHILIENRMQ SGNYTFNYAKKGAWIFTGITCAITAGCIILVFVCMLPLINIQEKITMTNNNLTISAGGYTSKIDVNDITELKLLDELPDD SFLRTNGASTDSYDIGRYEGRTLGKCSLYVFDGYSPILMIKSDDTLVFVNSKEDGEIEGLYEELSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53186; Mature: 53186
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIMMFIIFIITNLIIILCMQFAYTHAYKYENGMYLNVHIPSSHKEDAEVTEIVTTGKRK CHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCCCCCCHHHHHHHHHCHHH MKHFQIANVIISIAICFIVFFNIAVFVLVYIIWMFAYIFGIIHIPNSSHRKMYALKIQNG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEECCC WIIETQRKKVYIDTRVSAEAGATTVSYKWHALFLITELAAYIPYFMLGDTHYNILMISLF EEEEECCCEEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHH LCSVLISTLSLVFHAFINKSERHVYSMDSKLNLIVNNTMKKYKSIAMLLLSGLNAVAWIY HHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHH VALYTSITGILPASSYYVYIFIQLIAVLGFIVPIYMGLNRKKELLSANTSPIDVDDDEYW HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCE KTGYYYNPDDKHILIENRMQSGNYTFNYAKKGAWIFTGITCAITAGCIILVFVCMLPLIN ECCCEECCCCCEEEEEECCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCC IQEKITMTNNNLTISAGGYTSKIDVNDITELKLLDELPDDSFLRTNGASTDSYDIGRYEG CCCEEEEECCCEEEEECCEEEEECCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCC RTLGKCSLYVFDGYSPILMIKSDDTLVFVNSKEDGEIEGLYEELSQ CEECEEEEEEECCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHCC >Mature Secondary Structure MEIMMFIIFIITNLIIILCMQFAYTHAYKYENGMYLNVHIPSSHKEDAEVTEIVTTGKRK CHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCCCCCCHHHHHHHHHCHHH MKHFQIANVIISIAICFIVFFNIAVFVLVYIIWMFAYIFGIIHIPNSSHRKMYALKIQNG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEECCC WIIETQRKKVYIDTRVSAEAGATTVSYKWHALFLITELAAYIPYFMLGDTHYNILMISLF EEEEECCCEEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHH LCSVLISTLSLVFHAFINKSERHVYSMDSKLNLIVNNTMKKYKSIAMLLLSGLNAVAWIY HHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHH VALYTSITGILPASSYYVYIFIQLIAVLGFIVPIYMGLNRKKELLSANTSPIDVDDDEYW HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCE KTGYYYNPDDKHILIENRMQSGNYTFNYAKKGAWIFTGITCAITAGCIILVFVCMLPLIN ECCCEECCCCCEEEEEECCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCC IQEKITMTNNNLTISAGGYTSKIDVNDITELKLLDELPDDSFLRTNGASTDSYDIGRYEG CCCEEEEECCCEEEEECCEEEEECCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCC RTLGKCSLYVFDGYSPILMIKSDDTLVFVNSKEDGEIEGLYEELSQ CEECEEEEEEECCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA