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The map label for this gene is fdhD [H]

Identifier: 238921560

GI number: 238921560

Start: 3597341

End: 3598144

Strand: Reverse

Name: fdhD [H]

Synonym: NT01EI_3712

Alternate gene names: 238921560

Gene position: 3598144-3597341 (Counterclockwise)

Preceding gene: 238921566

Following gene: 238921559

Centisome position: 94.38

GC content: 63.31

Gene sequence:

>804_bases
ATGTCGCAGAGCGTGTGCGGCGCGACGACCGTTCCGGTCTGGCCACGTACCGAGCCGAGTGAGCAGCGGCCAGACTGGGT
CGCCAATGAAGTTCCGGTCGCGCTGGTCTATAACGGTATTTCTCACGTGGTGATGATGGCATCACCCAAGGAGCTGGAGG
CGTTTGCCCTGGGCTTCTCCCTGTCAGAGGGGATCATCCGTTCGCCGCAGGATATCTACGGCATGGAGGTTCAGACGGCC
TGTCATGGGCTAGAGGTTCAGATAGAGCTTTCCAGCCGTTGTTTTATGGCGTTGAAGGAACGTCGTCGCTCGCTGGCTGG
CCGAACCGGTTGCGGTGTGTGCGGTGTGGAGCAGATTGGCGATGCGCTGCGCCCGCTGGCGCCGTTGCCGTTTCGCCAGC
GTTTCGATCTGGCTGTGCTGGACGGTGCGCTGGCGCGCCTGCGTGAGGTGCAGAGCATCGGTAACCTGACTGGCTGTACC
CACGCCGCCGCATGGCTTGACGGCAAGGGCGTGCTGCAGGGTGGCTGCGAGGACGTGGGGCGTCATGTGGCATTGGATAA
GCTGTTGGGCCTGCGTGCTCGCCAGCCTGGGTGGCAGGCCGGCGCGGCACTGGTCTCCAGCCGCGCCAGCTATGAAATGG
TACAGAAGGCGGCGATGTGTGGGGTGGAGATCCTGTTCGCCGTCTCCGCGGCGACCACGCTGGCCATTGAAGTGGCTGAG
CGCTGCAATCTGACGCTGGTGGGGTTCTGCCGTCCCGGAAAGGGAACTATTTTTACCCATCCCCAGCGTCTGCGCGCTGT
CTGA

Upstream 100 bases:

>100_bases
AAAGTGATCGCCATGGATATATAGGCAGGCGGGGGATTCTGGATTTTTTCCTTGTCGGTCAATTTGATGGGAATAGCAGG
TGAATAAGAGAACGTCTCTA

Downstream 100 bases:

>100_bases
GTTATGACCGCATGCAGCGGTTTTCTCCGCAGCCGTTGCCCGCTATAGTGGCGGTTGGAAAATCCTTTACCCCTAATCTG
GAGCTATCGTCATGCGCTAT

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MSQSVCGATTVPVWPRTEPSEQRPDWVANEVPVALVYNGISHVVMMASPKELEAFALGFSLSEGIIRSPQDIYGMEVQTA
CHGLEVQIELSSRCFMALKERRRSLAGRTGCGVCGVEQIGDALRPLAPLPFRQRFDLAVLDGALARLREVQSIGNLTGCT
HAAAWLDGKGVLQGGCEDVGRHVALDKLLGLRARQPGWQAGAALVSSRASYEMVQKAAMCGVEILFAVSAATTLAIEVAE
RCNLTLVGFCRPGKGTIFTHPQRLRAV

Sequences:

>Translated_267_residues
MSQSVCGATTVPVWPRTEPSEQRPDWVANEVPVALVYNGISHVVMMASPKELEAFALGFSLSEGIIRSPQDIYGMEVQTA
CHGLEVQIELSSRCFMALKERRRSLAGRTGCGVCGVEQIGDALRPLAPLPFRQRFDLAVLDGALARLREVQSIGNLTGCT
HAAAWLDGKGVLQGGCEDVGRHVALDKLLGLRARQPGWQAGAALVSSRASYEMVQKAAMCGVEILFAVSAATTLAIEVAE
RCNLTLVGFCRPGKGTIFTHPQRLRAV
>Mature_266_residues
SQSVCGATTVPVWPRTEPSEQRPDWVANEVPVALVYNGISHVVMMASPKELEAFALGFSLSEGIIRSPQDIYGMEVQTAC
HGLEVQIELSSRCFMALKERRRSLAGRTGCGVCGVEQIGDALRPLAPLPFRQRFDLAVLDGALARLREVQSIGNLTGCTH
AAAWLDGKGVLQGGCEDVGRHVALDKLLGLRARQPGWQAGAALVSSRASYEMVQKAAMCGVEILFAVSAATTLAIEVAER
CNLTLVGFCRPGKGTIFTHPQRLRAV

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=262, Percent_Identity=71.3740458015267, Blast_Score=380, Evalue=1e-107,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 28687; Mature: 28555

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSVCGATTVPVWPRTEPSEQRPDWVANEVPVALVYNGISHVVMMASPKELEAFALGFS
CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHEEECCHHHEEEECCCCHHHHHHCCCH
LSEGIIRSPQDIYGMEVQTACHGLEVQIELSSRCFMALKERRRSLAGRTGCGVCGVEQIG
HCCCCCCCCHHHHCCCHHHHHCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
DALRPLAPLPFRQRFDLAVLDGALARLREVQSIGNLTGCTHAAAWLDGKGVLQGGCEDVG
HHHHCCCCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCHHHHH
RHVALDKLLGLRARQPGWQAGAALVSSRASYEMVQKAAMCGVEILFAVSAATTLAIEVAE
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RCNLTLVGFCRPGKGTIFTHPQRLRAV
HCCEEEEEEEECCCCCEEECHHHHCCC
>Mature Secondary Structure 
SQSVCGATTVPVWPRTEPSEQRPDWVANEVPVALVYNGISHVVMMASPKELEAFALGFS
CCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHEEECCHHHEEEECCCCHHHHHHCCCH
LSEGIIRSPQDIYGMEVQTACHGLEVQIELSSRCFMALKERRRSLAGRTGCGVCGVEQIG
HCCCCCCCCHHHHCCCHHHHHCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
DALRPLAPLPFRQRFDLAVLDGALARLREVQSIGNLTGCTHAAAWLDGKGVLQGGCEDVG
HHHHCCCCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCHHHHH
RHVALDKLLGLRARQPGWQAGAALVSSRASYEMVQKAAMCGVEILFAVSAATTLAIEVAE
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RCNLTLVGFCRPGKGTIFTHPQRLRAV
HCCEEEEEEEECCCCCEEECHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA