Click here to switch to the map view.

The map label for this gene is yigL [H]

Identifier: 238921566

GI number: 238921566

Start: 3604245

End: 3605042

Strand: Reverse

Name: yigL [H]

Synonym: NT01EI_3718

Alternate gene names: 238921566

Gene position: 3605042-3604245 (Counterclockwise)

Preceding gene: 238921567

Following gene: 238921560

Centisome position: 94.56

GC content: 59.27

Gene sequence:

>798_bases
ATGTATCATATCGTAGCTTCGGATATGGACGGCACCCTGCTGTCGCCCGCGCATACCCTGACCCCCTTTGCCCGGGAAAC
CCTGCGCCTGCTGACCCAGAAAGGGGTGCACTTCGTCTTCGCCACCGGACGTCACCATATCGATATCGCGCAGGTGCGCG
ACAGTCTGGGGATCAAGGCGTTTATGATCACCTCCAACGGTGCCCGGGTGCACGATCCGCTGGGTGAGCTTATCTTCAGT
GATAATGTGGATCCCGATATCGCCCGCGATCTCTTCTCGATCGTGCACGATGACCCGCAGATCCTGACCAATGTTTACCG
CAACGACGACTGGTTTATGAACCGTGAGGATCCCGCCCAGCGGGCGTTCTTCCAGGAGTCGGTGTTCCACTACCATGTCT
TTGAGTCGGCGATGCTGCCGGCGGACGGCATCTGTAAGGTCTATTACACCTGCGCCGATCATGATCGGCTGCTGCCGCTG
GAGAAGGCGATCAATGCCCGCTGGGGCGATCGGGTGAACGTCAGCTTCTCTCTGCCCACCTGTCTAGAGGTGATGGCCGG
TGGGGTGTCGAAGGGACATGCGCTGGAGTTTGTGGCGCACCGTTTGGGCTATGGTCTGCAAGAGTGTATCGCCTTTGGCG
ACGGCATGAATGACATGGAGATGCTGAGCATGGCGGGCAAAGGGGGCATCATGGCCGATGCGCACCAGCGCCTGAAGGAT
CTGCTGCCGCAGATGGCGGTGATCGGCAGCAACGCGGACGATGCAGTGCCGCACTATCTGCGCAAGATGTACCTCTAA

Upstream 100 bases:

>100_bases
CGTGCCGAAGCGATAACCGCTATCATGCTGTTTTTTAAACAATTTTATGAATCGTCGGCACCTATTGCCGCCAACCCCAG
CTGAGGTTAGAACGTACTCT

Downstream 100 bases:

>100_bases
GCGCTATCGGGATGGCCGGGCGCGCTGCGCCCGGCGTTGAGTCTTACTCCCCGGGGAACAGGAAGGGGTTAAGACTGCTG
CGGGCGAAGCCCGCCTCTTC

Product: protein cof

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MYHIVASDMDGTLLSPAHTLTPFARETLRLLTQKGVHFVFATGRHHIDIAQVRDSLGIKAFMITSNGARVHDPLGELIFS
DNVDPDIARDLFSIVHDDPQILTNVYRNDDWFMNREDPAQRAFFQESVFHYHVFESAMLPADGICKVYYTCADHDRLLPL
EKAINARWGDRVNVSFSLPTCLEVMAGGVSKGHALEFVAHRLGYGLQECIAFGDGMNDMEMLSMAGKGGIMADAHQRLKD
LLPQMAVIGSNADDAVPHYLRKMYL

Sequences:

>Translated_265_residues
MYHIVASDMDGTLLSPAHTLTPFARETLRLLTQKGVHFVFATGRHHIDIAQVRDSLGIKAFMITSNGARVHDPLGELIFS
DNVDPDIARDLFSIVHDDPQILTNVYRNDDWFMNREDPAQRAFFQESVFHYHVFESAMLPADGICKVYYTCADHDRLLPL
EKAINARWGDRVNVSFSLPTCLEVMAGGVSKGHALEFVAHRLGYGLQECIAFGDGMNDMEMLSMAGKGGIMADAHQRLKD
LLPQMAVIGSNADDAVPHYLRKMYL
>Mature_265_residues
MYHIVASDMDGTLLSPAHTLTPFARETLRLLTQKGVHFVFATGRHHIDIAQVRDSLGIKAFMITSNGARVHDPLGELIFS
DNVDPDIARDLFSIVHDDPQILTNVYRNDDWFMNREDPAQRAFFQESVFHYHVFESAMLPADGICKVYYTCADHDRLLPL
EKAINARWGDRVNVSFSLPTCLEVMAGGVSKGHALEFVAHRLGYGLQECIAFGDGMNDMEMLSMAGKGGIMADAHQRLKD
LLPQMAVIGSNADDAVPHYLRKMYL

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI48994981, Length=265, Percent_Identity=69.4339622641509, Blast_Score=403, Evalue=1e-114,
Organism=Escherichia coli, GI87081741, Length=260, Percent_Identity=38.0769230769231, Blast_Score=180, Evalue=9e-47,
Organism=Escherichia coli, GI1786982, Length=275, Percent_Identity=26.9090909090909, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: NA

Molecular weight: Translated: 29651; Mature: 29651

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: PS01228 COF_1 ; PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYHIVASDMDGTLLSPAHTLTPFARETLRLLTQKGVHFVFATGRHHIDIAQVRDSLGIKA
CEEEEECCCCCCEECCHHHHCHHHHHHHHHHHHCCCEEEEECCCCEEHHHHHHHHCCCEE
FMITSNGARVHDPLGELIFSDNVDPDIARDLFSIVHDDPQILTNVYRNDDWFMNREDPAQ
EEEECCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHH
RAFFQESVFHYHVFESAMLPADGICKVYYTCADHDRLLPLEKAINARWGDRVNVSFSLPT
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHCCCCCCEEEEEECCHH
CLEVMAGGVSKGHALEFVAHRLGYGLQECIAFGDGMNDMEMLSMAGKGGIMADAHQRLKD
HHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHH
LLPQMAVIGSNADDAVPHYLRKMYL
HHHHHHHHCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MYHIVASDMDGTLLSPAHTLTPFARETLRLLTQKGVHFVFATGRHHIDIAQVRDSLGIKA
CEEEEECCCCCCEECCHHHHCHHHHHHHHHHHHCCCEEEEECCCCEEHHHHHHHHCCCEE
FMITSNGARVHDPLGELIFSDNVDPDIARDLFSIVHDDPQILTNVYRNDDWFMNREDPAQ
EEEECCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHH
RAFFQESVFHYHVFESAMLPADGICKVYYTCADHDRLLPLEKAINARWGDRVNVSFSLPT
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHCCCCCCEEEEEECCHH
CLEVMAGGVSKGHALEFVAHRLGYGLQECIAFGDGMNDMEMLSMAGKGGIMADAHQRLKD
HHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHH
LLPQMAVIGSNADDAVPHYLRKMYL
HHHHHHHHCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]