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The map label for this gene is yiiM [H]

Identifier: 238921559

GI number: 238921559

Start: 3596575

End: 3597249

Strand: Reverse

Name: yiiM [H]

Synonym: NT01EI_3711

Alternate gene names: 238921559

Gene position: 3597249-3596575 (Counterclockwise)

Preceding gene: 238921560

Following gene: 238921557

Centisome position: 94.36

GC content: 60.59

Gene sequence:

>675_bases
ATGCGCTATCCCGAAGTCTACGTTGGTCGCTGTGCACCTTTTATCGGCGGTAAAAGCAGCGCTATCGTTAAGCGCCAGAT
GACCGATACCCTGGCGCTGCTGCGTCTGGGTCTGGCCGGGGATGAACAGGCGGAATCGCAGGTACACGGCGGCGCCGATC
GGGCGCTGTGTCACTATCCGCGCGAGCACTATGATTACTGGCGACAGACCTATCCTCAGCAGGCGGAGCGCTTTGAGGCC
GCGGTCTTCGGTGAAAACCTGTCGACCATCGGGATGGATGAGACGTCGGTCTTTATCGGCGATATTTATCGTTGGGGCGA
GGCGCTGATTCAGGTGACTCAGCCGCGCTCTCCCTGCTACAAGCTGAATCAGATGATGGAGTTAGGCGATCTCTCCCTGC
ACATGCAGCAAAGCGGCCGCTGTGGCTGGCTGTACCGCGTCGTGGCGGAAGGGCGGGTTGGCGATCGCTGCCCGCTGGAG
CTGGTGTCGTGCAACGGCGATATCAGCGTGGCGCAGTGTATCGCCATTGTTTTCCACATGCCGTTCGATGAAGCGGAGTA
CCGCCGCTTGCTGGCCTGCGCCGGGCTCTCCGCCAGCTGGTGCAAGACATTGCAGAATCGCCTACTGCACGGGCGCATTG
AAGATATGAACCGGCGTTTGTTCGGGCGGGGGTAG

Upstream 100 bases:

>100_bases
GCTGTCTGAGTTATGACCGCATGCAGCGGTTTTCTCCGCAGCCGTTGCCCGCTATAGTGGCGGTTGGAAAATCCTTTACC
CCTAATCTGGAGCTATCGTC

Downstream 100 bases:

>100_bases
CGCCGGCCCCGTGGAATGCAGGTCGGCGGCGGTGGATCAGAGATACAGGGAGCGGACGATCAGAAAGTGTCCGACGAAGT
AGCCGAAGGCGATGAGAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MRYPEVYVGRCAPFIGGKSSAIVKRQMTDTLALLRLGLAGDEQAESQVHGGADRALCHYPREHYDYWRQTYPQQAERFEA
AVFGENLSTIGMDETSVFIGDIYRWGEALIQVTQPRSPCYKLNQMMELGDLSLHMQQSGRCGWLYRVVAEGRVGDRCPLE
LVSCNGDISVAQCIAIVFHMPFDEAEYRRLLACAGLSASWCKTLQNRLLHGRIEDMNRRLFGRG

Sequences:

>Translated_224_residues
MRYPEVYVGRCAPFIGGKSSAIVKRQMTDTLALLRLGLAGDEQAESQVHGGADRALCHYPREHYDYWRQTYPQQAERFEA
AVFGENLSTIGMDETSVFIGDIYRWGEALIQVTQPRSPCYKLNQMMELGDLSLHMQQSGRCGWLYRVVAEGRVGDRCPLE
LVSCNGDISVAQCIAIVFHMPFDEAEYRRLLACAGLSASWCKTLQNRLLHGRIEDMNRRLFGRG
>Mature_224_residues
MRYPEVYVGRCAPFIGGKSSAIVKRQMTDTLALLRLGLAGDEQAESQVHGGADRALCHYPREHYDYWRQTYPQQAERFEA
AVFGENLSTIGMDETSVFIGDIYRWGEALIQVTQPRSPCYKLNQMMELGDLSLHMQQSGRCGWLYRVVAEGRVGDRCPLE
LVSCNGDISVAQCIAIVFHMPFDEAEYRRLLACAGLSASWCKTLQNRLLHGRIEDMNRRLFGRG

Specific function: Unknown

COG id: COG2258

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MOSC domain [H]

Homologues:

Organism=Escherichia coli, GI87082350, Length=224, Percent_Identity=58.0357142857143, Blast_Score=281, Evalue=3e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005163
- InterPro:   IPR005302
- InterPro:   IPR015808
- InterPro:   IPR011037 [H]

Pfam domain/function: PF03475 3-alpha; PF03473 MOSC [H]

EC number: NA

Molecular weight: Translated: 25374; Mature: 25374

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYPEVYVGRCAPFIGGKSSAIVKRQMTDTLALLRLGLAGDEQAESQVHGGADRALCHYP
CCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHCC
REHYDYWRQTYPQQAERFEAAVFGENLSTIGMDETSVFIGDIYRWGEALIQVTQPRSPCY
HHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCHHH
KLNQMMELGDLSLHMQQSGRCGWLYRVVAEGRVGDRCPLELVSCNGDISVAQCIAIVFHM
HHHHHHHHCCHHEECCCCCCCHHHHHEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHC
PFDEAEYRRLLACAGLSASWCKTLQNRLLHGRIEDMNRRLFGRG
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCC
>Mature Secondary Structure
MRYPEVYVGRCAPFIGGKSSAIVKRQMTDTLALLRLGLAGDEQAESQVHGGADRALCHYP
CCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHCC
REHYDYWRQTYPQQAERFEAAVFGENLSTIGMDETSVFIGDIYRWGEALIQVTQPRSPCY
HHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCHHH
KLNQMMELGDLSLHMQQSGRCGWLYRVVAEGRVGDRCPLELVSCNGDISVAQCIAIVFHM
HHHHHHHHCCHHEECCCCCCCHHHHHEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHC
PFDEAEYRRLLACAGLSASWCKTLQNRLLHGRIEDMNRRLFGRG
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503 [H]