Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
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Accession | NC_012779 |
Length | 3,812,315 |
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The map label for this gene is 238921557
Identifier: 238921557
GI number: 238921557
Start: 3595400
End: 3595717
Strand: Reverse
Name: 238921557
Synonym: NT01EI_3709
Alternate gene names: NA
Gene position: 3595717-3595400 (Counterclockwise)
Preceding gene: 238921559
Following gene: 238921556
Centisome position: 94.32
GC content: 52.83
Gene sequence:
>318_bases ATGTCCAGTCAGCCGCTATACCGTATCCAGTTCATGAATAACGGAAAAAACTATCAGCTGTACGTGCGGGAAATCATACA GAGTCCGTTGTTTGGCTTTATTGAGATCGCGGATTTCGTCTTTGGCAGCCACGGCTCGCTGCTGGTCGATCCGAGTGAAG AGAAGCTGAAGAGCGAGTTCGCCGGGGTAACGCGCAGCTATATCCCGATTCAGGCGGTGATCCGTATCGATGCCGTGACC GAGCGCGGCAGCGCCCGCATTTCTGATCTGGCTGATAATGTGGCGGTATTTCCGCTATTTAACGGGAAGAAGTCCTGA
Upstream 100 bases:
>100_bases CCCGCTGCCGATGCAAAGGCGATGCTCCCTATGTTAGGCTGTGGGCGCGCCCGTCGGGCGATTGTGTTAAATGTCTTAAC GGAGGAGTCGACGCCGTATC
Downstream 100 bases:
>100_bases TGGAGCGCACGCCGCTGTTTTTTATCATCGTGGTGGCCGCGATCGTGCTGCTGGCGACCCAGCGCTTTGTTCAGCAGCGG CGCCAGGATGCCGCCAACGA
Product: hypothetical protein
Products: NA
Alternate protein names: Protein Conserved In Bacteria
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MSSQPLYRIQFMNNGKNYQLYVREIIQSPLFGFIEIADFVFGSHGSLLVDPSEEKLKSEFAGVTRSYIPIQAVIRIDAVT ERGSARISDLADNVAVFPLFNGKKS
Sequences:
>Translated_105_residues MSSQPLYRIQFMNNGKNYQLYVREIIQSPLFGFIEIADFVFGSHGSLLVDPSEEKLKSEFAGVTRSYIPIQAVIRIDAVT ERGSARISDLADNVAVFPLFNGKKS >Mature_104_residues SSQPLYRIQFMNNGKNYQLYVREIIQSPLFGFIEIADFVFGSHGSLLVDPSEEKLKSEFAGVTRSYIPIQAVIRIDAVTE RGSARISDLADNVAVFPLFNGKKS
Specific function: Unknown
COG id: COG4517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11760; Mature: 11628
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSQPLYRIQFMNNGKNYQLYVREIIQSPLFGFIEIADFVFGSHGSLLVDPSEEKLKSEF CCCCCEEEEEEECCCCCEEHHHHHHHHCCHHHHHHHHHHHHCCCCCEEECCCHHHHHHHH AGVTRSYIPIQAVIRIDAVTERGSARISDLADNVAVFPLFNGKKS HHCCCCCCCEEEEEEEECCCCCCCCHHHHHCCCEEEEEECCCCCC >Mature Secondary Structure SSQPLYRIQFMNNGKNYQLYVREIIQSPLFGFIEIADFVFGSHGSLLVDPSEEKLKSEF CCCCEEEEEEECCCCCEEHHHHHHHHCCHHHHHHHHHHHHCCCCCEEECCCHHHHHHHH AGVTRSYIPIQAVIRIDAVTERGSARISDLADNVAVFPLFNGKKS HHCCCCCCCEEEEEEEECCCCCCCCHHHHHCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA