Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is yhhM [H]

Identifier: 238921556

GI number: 238921556

Start: 3595044

End: 3595400

Strand: Reverse

Name: yhhM [H]

Synonym: NT01EI_3708

Alternate gene names: 238921556

Gene position: 3595400-3595044 (Counterclockwise)

Preceding gene: 238921557

Following gene: 238921553

Centisome position: 94.31

GC content: 66.11

Gene sequence:

>357_bases
ATGGAGCGCACGCCGCTGTTTTTTATCATCGTGGTGGCCGCGATCGTGCTGCTGGCGACCCAGCGCTTTGTTCAGCAGCG
GCGCCAGGATGCCGCCAACGATGCCGCGCCACTGCAGATCCTGCGGGTGACTCTGACGGAGAAGCGCGCGCTGCCGTCGC
CGCTGCGCTCGCGCCAGCGGGAGGAGATCGTCGCTGAAACGGTACGCTATACGCTGCTGTTCAGCGGCGAGGGCGGGGGT
GCACCGCTGCGCTTTACGTTGCCCGGGCGTGACTGCGCTGTGCTGAGACCGGGAGTGCAGGGAACCCTGCGCGTACAGGG
TAGCCGGTTTATCGACTTTACGCCGGATGCTGCCTGA

Upstream 100 bases:

>100_bases
TGATCCGTATCGATGCCGTGACCGAGCGCGGCAGCGCCCGCATTTCTGATCTGGCTGATAATGTGGCGGTATTTCCGCTA
TTTAACGGGAAGAAGTCCTG

Downstream 100 bases:

>100_bases
GCGGTATCCGTTTACTTTTTTTGGCGCGGCGGTTGTTTCTTTTGCCAGGCGAGCAGCTCGAATACGCCGAACAGAAAGAT
GCGCAGTTCCAACCAAAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MERTPLFFIIVVAAIVLLATQRFVQQRRQDAANDAAPLQILRVTLTEKRALPSPLRSRQREEIVAETVRYTLLFSGEGGG
APLRFTLPGRDCAVLRPGVQGTLRVQGSRFIDFTPDAA

Sequences:

>Translated_118_residues
MERTPLFFIIVVAAIVLLATQRFVQQRRQDAANDAAPLQILRVTLTEKRALPSPLRSRQREEIVAETVRYTLLFSGEGGG
APLRFTLPGRDCAVLRPGVQGTLRVQGSRFIDFTPDAA
>Mature_118_residues
MERTPLFFIIVVAAIVLLATQRFVQQRRQDAANDAAPLQILRVTLTEKRALPSPLRSRQREEIVAETVRYTLLFSGEGGG
APLRFTLPGRDCAVLRPGVQGTLRVQGSRFIDFTPDAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789877, Length=115, Percent_Identity=42.6086956521739, Blast_Score=84, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019635 [H]

Pfam domain/function: PF10694 DUF2500 [H]

EC number: NA

Molecular weight: Translated: 13076; Mature: 13076

Theoretical pI: Translated: 11.45; Mature: 11.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERTPLFFIIVVAAIVLLATQRFVQQRRQDAANDAAPLQILRVTLTEKRALPSPLRSRQR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEHHHCCCCCCHHHHHHH
EEIVAETVRYTLLFSGEGGGAPLRFTLPGRDCAVLRPGVQGTLRVQGSRFIDFTPDAA
HHHHHHHHHEEEEECCCCCCCCEEEEECCCCEEEECCCCCEEEEECCCEEEECCCCCC
>Mature Secondary Structure
MERTPLFFIIVVAAIVLLATQRFVQQRRQDAANDAAPLQILRVTLTEKRALPSPLRSRQR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEHHHCCCCCCHHHHHHH
EEIVAETVRYTLLFSGEGGGAPLRFTLPGRDCAVLRPGVQGTLRVQGSRFIDFTPDAA
HHHHHHHHHEEEEECCCCCCCCEEEEECCCCEEEECCCCCEEEEECCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]