Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
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Accession | NC_012779 |
Length | 3,812,315 |
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The map label for this gene is yhhM [H]
Identifier: 238921556
GI number: 238921556
Start: 3595044
End: 3595400
Strand: Reverse
Name: yhhM [H]
Synonym: NT01EI_3708
Alternate gene names: 238921556
Gene position: 3595400-3595044 (Counterclockwise)
Preceding gene: 238921557
Following gene: 238921553
Centisome position: 94.31
GC content: 66.11
Gene sequence:
>357_bases ATGGAGCGCACGCCGCTGTTTTTTATCATCGTGGTGGCCGCGATCGTGCTGCTGGCGACCCAGCGCTTTGTTCAGCAGCG GCGCCAGGATGCCGCCAACGATGCCGCGCCACTGCAGATCCTGCGGGTGACTCTGACGGAGAAGCGCGCGCTGCCGTCGC CGCTGCGCTCGCGCCAGCGGGAGGAGATCGTCGCTGAAACGGTACGCTATACGCTGCTGTTCAGCGGCGAGGGCGGGGGT GCACCGCTGCGCTTTACGTTGCCCGGGCGTGACTGCGCTGTGCTGAGACCGGGAGTGCAGGGAACCCTGCGCGTACAGGG TAGCCGGTTTATCGACTTTACGCCGGATGCTGCCTGA
Upstream 100 bases:
>100_bases TGATCCGTATCGATGCCGTGACCGAGCGCGGCAGCGCCCGCATTTCTGATCTGGCTGATAATGTGGCGGTATTTCCGCTA TTTAACGGGAAGAAGTCCTG
Downstream 100 bases:
>100_bases GCGGTATCCGTTTACTTTTTTTGGCGCGGCGGTTGTTTCTTTTGCCAGGCGAGCAGCTCGAATACGCCGAACAGAAAGAT GCGCAGTTCCAACCAAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MERTPLFFIIVVAAIVLLATQRFVQQRRQDAANDAAPLQILRVTLTEKRALPSPLRSRQREEIVAETVRYTLLFSGEGGG APLRFTLPGRDCAVLRPGVQGTLRVQGSRFIDFTPDAA
Sequences:
>Translated_118_residues MERTPLFFIIVVAAIVLLATQRFVQQRRQDAANDAAPLQILRVTLTEKRALPSPLRSRQREEIVAETVRYTLLFSGEGGG APLRFTLPGRDCAVLRPGVQGTLRVQGSRFIDFTPDAA >Mature_118_residues MERTPLFFIIVVAAIVLLATQRFVQQRRQDAANDAAPLQILRVTLTEKRALPSPLRSRQREEIVAETVRYTLLFSGEGGG APLRFTLPGRDCAVLRPGVQGTLRVQGSRFIDFTPDAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789877, Length=115, Percent_Identity=42.6086956521739, Blast_Score=84, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019635 [H]
Pfam domain/function: PF10694 DUF2500 [H]
EC number: NA
Molecular weight: Translated: 13076; Mature: 13076
Theoretical pI: Translated: 11.45; Mature: 11.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERTPLFFIIVVAAIVLLATQRFVQQRRQDAANDAAPLQILRVTLTEKRALPSPLRSRQR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEHHHCCCCCCHHHHHHH EEIVAETVRYTLLFSGEGGGAPLRFTLPGRDCAVLRPGVQGTLRVQGSRFIDFTPDAA HHHHHHHHHEEEEECCCCCCCCEEEEECCCCEEEECCCCCEEEEECCCEEEECCCCCC >Mature Secondary Structure MERTPLFFIIVVAAIVLLATQRFVQQRRQDAANDAAPLQILRVTLTEKRALPSPLRSRQR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEHHHCCCCCCHHHHHHH EEIVAETVRYTLLFSGEGGGAPLRFTLPGRDCAVLRPGVQGTLRVQGSRFIDFTPDAA HHHHHHHHHEEEEECCCCCCCCEEEEECCCCEEEECCCCCEEEEECCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]