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The map label for this gene is yjbR [H]

Identifier: 238921394

GI number: 238921394

Start: 3439945

End: 3440292

Strand: Reverse

Name: yjbR [H]

Synonym: NT01EI_3538

Alternate gene names: 238921394

Gene position: 3440292-3439945 (Counterclockwise)

Preceding gene: 238921395

Following gene: 238921392

Centisome position: 90.24

GC content: 58.05

Gene sequence:

>348_bases
TTGATGAATGATTCGGCTTTTATGCAATACTGCCTGTCAAAGCCTGGCGCGCAGCAGAGCCTGCAAAACCGCTGGCGGAC
GCATCAGGCTCGTATCGGTGGTATTTTGTTCGCCATGGTTGAAAACGGTGAAGGGCGCCCGGCAGTCGCGGTGAAAACCA
GCTGCGAACAGGCTGCCCGCCTGCGCAGCCTGCATAAAGATATCGTGCCCAGCCGTCGGCTGAACAAGGCGCACTGGAGC
ACTGTATTTCTGGACGGCGCTATCAACGACTCGCTGCTGTATCAGCTGGTGGATAGCTCCTATCAGATGGCGCTGCACCA
GGCCGGCGATGCGCACTTGCTGCAGTAG

Upstream 100 bases:

>100_bases
CGGGCGTTGCAGCTTGAAACCTGGCAGGGTATTTGGCTTGGTGAACACCGCCTACAGGGCAGTGCGCGCCGTATTGTAGC
AACCATACAAGGGGATAGGA

Downstream 100 bases:

>100_bases
TGCTTCTCTCTGCACACCTGCCGCCGGTACGAGGCATCCGGCGTAGGGATGATGACGGCGTGTTTCTCCACGCCGTCAGG
TTCCCTTAGGCATTGTCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MMNDSAFMQYCLSKPGAQQSLQNRWRTHQARIGGILFAMVENGEGRPAVAVKTSCEQAARLRSLHKDIVPSRRLNKAHWS
TVFLDGAINDSLLYQLVDSSYQMALHQAGDAHLLQ

Sequences:

>Translated_115_residues
MMNDSAFMQYCLSKPGAQQSLQNRWRTHQARIGGILFAMVENGEGRPAVAVKTSCEQAARLRSLHKDIVPSRRLNKAHWS
TVFLDGAINDSLLYQLVDSSYQMALHQAGDAHLLQ
>Mature_115_residues
MMNDSAFMQYCLSKPGAQQSLQNRWRTHQARIGGILFAMVENGEGRPAVAVKTSCEQAARLRSLHKDIVPSRRLNKAHWS
TVFLDGAINDSLLYQLVDSSYQMALHQAGDAHLLQ

Specific function: Unknown

COG id: COG2315

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI2367342, Length=105, Percent_Identity=55.2380952380952, Blast_Score=130, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007351 [H]

Pfam domain/function: PF04237 DUF419 [H]

EC number: NA

Molecular weight: Translated: 12869; Mature: 12869

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNDSAFMQYCLSKPGAQQSLQNRWRTHQARIGGILFAMVENGEGRPAVAVKTSCEQAAR
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCEEEEHHHHHHHHH
LRSLHKDIVPSRRLNKAHWSTVFLDGAINDSLLYQLVDSSYQMALHQAGDAHLLQ
HHHHHHHHCCCCCCCCHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MMNDSAFMQYCLSKPGAQQSLQNRWRTHQARIGGILFAMVENGEGRPAVAVKTSCEQAAR
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCEEEEHHHHHHHHH
LRSLHKDIVPSRRLNKAHWSTVFLDGAINDSLLYQLVDSSYQMALHQAGDAHLLQ
HHHHHHHHCCCCCCCCHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]