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The map label for this gene is ssb [H]

Identifier: 238921392

GI number: 238921392

Start: 3436252

End: 3436800

Strand: Reverse

Name: ssb [H]

Synonym: NT01EI_3536

Alternate gene names: 238921392

Gene position: 3436800-3436252 (Counterclockwise)

Preceding gene: 238921394

Following gene: 238921391

Centisome position: 90.15

GC content: 63.75

Gene sequence:

>549_bases
ATGGCCAGCAGAGGCGTAAATAAAGTGATTCTTATCGGGAATCTGGGTCAGGACCCGGAGGTCCGCTATATGCCGAACGG
CGGCGCCGTTGCCAATTTGACGCTGGCAACCTCTGACAGCTGGCGTGACAAGCAGACCGGTGAGCAGAAAGAGCGCACCG
AATGGCACCGTGTTGCGCTGTACGGCAAGCTGGCGGAAATCGCCGGTGAGTACCTGCGTAAAGGCTCCCAAGTGTACATC
GAAGGCCAGCTGCGTACCCGTAAGTGGCAGGATCAGAGCGGCCAGGATCGCTATACCACGGAAGTGGTGGTCGATATCAG
CGGTTCCATGCAGATGCTGGGCGGCCGCCAAGGCGGCGCGCCGATGGGCAACCAGGGGCAGCAGGGTGGCTGGGGTCAGC
CGCAGCAGCCGCAGGGCGCCGCATTCAGCGGCGGCCAGGCGGCACCGCGTCAGCAGTCACAGCAGGGCGGCTATTCCGCG
CCGGCTCAGCCGGCAGCGCCGCAGAGCAGCGAACCGCCGATGGACTTTGACGACGATATCCCGTTCTGA

Upstream 100 bases:

>100_bases
CCGAGCGCCTGCACAAAACGATGATGAGTGCTCAAGCGCCGCTGGCGTGTTAGAATTTACGGTTTAGACTGAATAAATTT
ACTTAATCGGGAGAGTCGAC

Downstream 100 bases:

>100_bases
TTGCGCGCGGGTATTCCCCCTTAAGGCCCCGCAGCGCGGGGCTTTTTACTATTATTGTCGCCAGAGAGCGGACACCACCC
GGTATAACCGTTTCCGTAGA

Product: single-stranded DNA-binding protein (SSB)

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MASRGVNKVILIGNLGQDPEVRYMPNGGAVANLTLATSDSWRDKQTGEQKERTEWHRVALYGKLAEIAGEYLRKGSQVYI
EGQLRTRKWQDQSGQDRYTTEVVVDISGSMQMLGGRQGGAPMGNQGQQGGWGQPQQPQGAAFSGGQAAPRQQSQQGGYSA
PAQPAAPQSSEPPMDFDDDIPF

Sequences:

>Translated_182_residues
MASRGVNKVILIGNLGQDPEVRYMPNGGAVANLTLATSDSWRDKQTGEQKERTEWHRVALYGKLAEIAGEYLRKGSQVYI
EGQLRTRKWQDQSGQDRYTTEVVVDISGSMQMLGGRQGGAPMGNQGQQGGWGQPQQPQGAAFSGGQAAPRQQSQQGGYSA
PAQPAAPQSSEPPMDFDDDIPF
>Mature_181_residues
ASRGVNKVILIGNLGQDPEVRYMPNGGAVANLTLATSDSWRDKQTGEQKERTEWHRVALYGKLAEIAGEYLRKGSQVYIE
GQLRTRKWQDQSGQDRYTTEVVVDISGSMQMLGGRQGGAPMGNQGQQGGWGQPQQPQGAAFSGGQAAPRQQSQQGGYSAP
AQPAAPQSSEPPMDFDDDIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=111, Percent_Identity=31.5315315315315, Blast_Score=72, Evalue=2e-13,
Organism=Escherichia coli, GI1790494, Length=189, Percent_Identity=72.4867724867725, Blast_Score=243, Evalue=4e-66,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 19682; Mature: 19551

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASRGVNKVILIGNLGQDPEVRYMPNGGAVANLTLATSDSWRDKQTGEQKERTEWHRVAL
CCCCCCCEEEEEECCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH
YGKLAEIAGEYLRKGSQVYIEGQLRTRKWQDQSGQDRYTTEVVVDISGSMQMLGGRQGGA
HHHHHHHHHHHHHCCCEEEEECCEECCCCCCCCCCCCEEEEEEEECCCCEEEECCCCCCC
PMGNQGQQGGWGQPQQPQGAAFSGGQAAPRQQSQQGGYSAPAQPAAPQSSEPPMDFDDDI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PF
CC
>Mature Secondary Structure 
ASRGVNKVILIGNLGQDPEVRYMPNGGAVANLTLATSDSWRDKQTGEQKERTEWHRVAL
CCCCCCEEEEEECCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH
YGKLAEIAGEYLRKGSQVYIEGQLRTRKWQDQSGQDRYTTEVVVDISGSMQMLGGRQGGA
HHHHHHHHHHHHHCCCEEEEECCEECCCCCCCCCCCCEEEEEEEECCCCEEEECCCCCCC
PMGNQGQQGGWGQPQQPQGAAFSGGQAAPRQQSQQGGYSAPAQPAAPQSSEPPMDFDDDI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PF
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9973335; 10952301 [H]