Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
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Accession | NC_012779 |
Length | 3,812,315 |
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The map label for this gene is 238921267
Identifier: 238921267
GI number: 238921267
Start: 3296317
End: 3296463
Strand: Reverse
Name: 238921267
Synonym: NT01EI_3410
Alternate gene names: NA
Gene position: 3296463-3296317 (Counterclockwise)
Preceding gene: 238921272
Following gene: 238921266
Centisome position: 86.47
GC content: 48.3
Gene sequence:
>147_bases ATGCGCTATCGGGGGGAACGTAAAGAGAACCCCCGGCGGCGTCTGACGCTATTGATGGCGGAGAACTGTTTGTTGCCAGA GGGAAAAAGCGCCGTCAAAAAGAGAGATAAAGGGTTCAGGAAATATCGTAAAAAGACATATCAATAG
Upstream 100 bases:
>100_bases AGCGTCTATTCCATAAATTAATTATTATCATTAGTGACATTTATTTATTGATATTATCGCCGTGCGTCATTTACATGCGG TGAAGGATTATGCACATCGA
Downstream 100 bases:
>100_bases GTTTTATATTGTTTTTCGGGAAAAACTGGCTACACTTTTTTCACAATATTATCTGACGGCGTACGCTACTGTAGAGGGAA GGGCGATCGTTATTTTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 48; Mature: 48
Protein sequence:
>48_residues MRYRGERKENPRRRLTLLMAENCLLPEGKSAVKKRDKGFRKYRKKTYQ
Sequences:
>Translated_48_residues MRYRGERKENPRRRLTLLMAENCLLPEGKSAVKKRDKGFRKYRKKTYQ >Mature_48_residues MRYRGERKENPRRRLTLLMAENCLLPEGKSAVKKRDKGFRKYRKKTYQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5901; Mature: 5901
Theoretical pI: Translated: 11.42; Mature: 11.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYRGERKENPRRRLTLLMAENCLLPEGKSAVKKRDKGFRKYRKKTYQ CCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRYRGERKENPRRRLTLLMAENCLLPEGKSAVKKRDKGFRKYRKKTYQ CCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA