Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
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Accession | NC_012779 |
Length | 3,812,315 |
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The map label for this gene is 238921272
Identifier: 238921272
GI number: 238921272
Start: 3304205
End: 3304330
Strand: Reverse
Name: 238921272
Synonym: NT01EI_3415
Alternate gene names: NA
Gene position: 3304330-3304205 (Counterclockwise)
Preceding gene: 238921273
Following gene: 238921267
Centisome position: 86.68
GC content: 61.9
Gene sequence:
>126_bases ATGGCTCTGCTGCTGTTCGTTCCGTTGGGTGAATCCCTGTTCTATCTGACCGTGGCCTGCATCGCCGTTGCCTCTGCGTG CCGGAGAGCGCCAACAGCGCGGCCTTTCGGCTGCGCTGTTGGTTGA
Upstream 100 bases:
>100_bases CGTGGCGAAAATATGGGGGACAGGTGGCGCTGGGGGGCTGTCGGATAACGTGTCCCATATCCGGGGCATTTCGTCGGCGT AGGTTGTCACACTGCCGGGG
Downstream 100 bases:
>100_bases CGATGTTGCCCGGTTACGCGGCCAGCAGGCTGCGAACAAAGTCGATAATCGCCGCATCCTGCCCCTGTTCAAACAGGCAC TGCTGGAAACGCGCGCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 41; Mature: 40
Protein sequence:
>41_residues MALLLFVPLGESLFYLTVACIAVASACRRAPTARPFGCAVG
Sequences:
>Translated_41_residues MALLLFVPLGESLFYLTVACIAVASACRRAPTARPFGCAVG >Mature_40_residues ALLLFVPLGESLFYLTVACIAVASACRRAPTARPFGCAVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4257; Mature: 4126
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 9.8 %Cys+Met (Translated Protein) 7.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLLFVPLGESLFYLTVACIAVASACRRAPTARPFGCAVG CEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure ALLLFVPLGESLFYLTVACIAVASACRRAPTARPFGCAVG EEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA