| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238921096
Identifier: 238921096
GI number: 238921096
Start: 3107950
End: 3108126
Strand: Direct
Name: 238921096
Synonym: NT01EI_3232
Alternate gene names: NA
Gene position: 3107950-3108126 (Clockwise)
Preceding gene: 238921091
Following gene: 238921097
Centisome position: 81.52
GC content: 46.89
Gene sequence:
>177_bases GTGGCACACACAAATCCCTCACTCACCTCCGAGCAAAGAATCAAAGAACTGGAAGAGCAACTGAAGCTGGTAAATCAGAA AGCTGAGTTTTTTTACGTCCTGAAAAACGATTACGGGGTGAACATGGTAAAAAAGCGGCCCGGCAAGTCCTCGCGCAAAG TCAGGCCGCAAAAATAA
Upstream 100 bases:
>100_bases CGGTATTCAGGGACGCTCCACCGTTCTTGTCTGGTCGCGTAAATATGGCCGTCTTGACTGGAGCTCTGGGTTCCCTGACC GAGTGAAAAGGAAACTGCCT
Downstream 100 bases:
>100_bases CCGTTATGCGCGCATGCCAGTTTCTGGGGCACAGTAGACAGGCCTGGTATCAGGACAAGGGCAGGTACAATAAATGACTG GGGGGTAATATTCATTTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: ISPsy11 Transposase OrfA
Number of amino acids: Translated: 58; Mature: 57
Protein sequence:
>58_residues MAHTNPSLTSEQRIKELEEQLKLVNQKAEFFYVLKNDYGVNMVKKRPGKSSRKVRPQK
Sequences:
>Translated_58_residues MAHTNPSLTSEQRIKELEEQLKLVNQKAEFFYVLKNDYGVNMVKKRPGKSSRKVRPQK >Mature_57_residues AHTNPSLTSEQRIKELEEQLKLVNQKAEFFYVLKNDYGVNMVKKRPGKSSRKVRPQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6819; Mature: 6688
Theoretical pI: Translated: 10.76; Mature: 10.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHTNPSLTSEQRIKELEEQLKLVNQKAEFFYVLKNDYGVNMVKKRPGKSSRKVRPQK CCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCC >Mature Secondary Structure AHTNPSLTSEQRIKELEEQLKLVNQKAEFFYVLKNDYGVNMVKKRPGKSSRKVRPQK CCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA