| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238921097
Identifier: 238921097
GI number: 238921097
Start: 3108312
End: 3108557
Strand: Direct
Name: 238921097
Synonym: NT01EI_3233
Alternate gene names: NA
Gene position: 3108312-3108557 (Clockwise)
Preceding gene: 238921096
Following gene: 238921098
Centisome position: 81.53
GC content: 54.88
Gene sequence:
>246_bases ATGCTGAATATCGGGCGGGACCGCTTGTTTACCCTACAGGATGAACACCGGCTCCCGGTATCGGTGAAACGGGAATATCA CAAAACCACCAACAGCCATCGTCGGTTTTACTGGCATCCGAATCCGCTGAAACCCGGCCCCGGACAGGCTACTACCCTTA AGCCGGAGCAAGTCTGGGTTGCTGACATGACTTACCTTCCGCTGCGCAGTGGCACAGTCTATCTGAGTCTGATCACTGAT GCCTGA
Upstream 100 bases:
>100_bases TAATATTCATTTCATTGATTTTATTGACCATATTCAGATAAATCAGCCACAAATTGGTACGCGTAAACTGGACTACCGGC TGAACAGTCAGGCCGACAGA
Downstream 100 bases:
>100_bases CCCAGAAGAGTCATGGGTTATCATGTGGGGGAAAATCTGCAGACTGAAAATGTGGTGAAAGCGTTCAGGCGGGCACTGAG GCGGAGAAAAACGACAGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 81; Mature: 81
Protein sequence:
>81_residues MLNIGRDRLFTLQDEHRLPVSVKREYHKTTNSHRRFYWHPNPLKPGPGQATTLKPEQVWVADMTYLPLRSGTVYLSLITD A
Sequences:
>Translated_81_residues MLNIGRDRLFTLQDEHRLPVSVKREYHKTTNSHRRFYWHPNPLKPGPGQATTLKPEQVWVADMTYLPLRSGTVYLSLITD A >Mature_81_residues MLNIGRDRLFTLQDEHRLPVSVKREYHKTTNSHRRFYWHPNPLKPGPGQATTLKPEQVWVADMTYLPLRSGTVYLSLITD A
Specific function: Unknown
COG id: COG2801
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9461; Mature: 9461
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNIGRDRLFTLQDEHRLPVSVKREYHKTTNSHRRFYWHPNPLKPGPGQATTLKPEQVWV CCCCCCCEEEEECCCCCCCEEECHHHHCCCCCCCEEEECCCCCCCCCCCCEEECCCEEEE ADMTYLPLRSGTVYLSLITDA ECEEEEEECCCEEEEEEEECC >Mature Secondary Structure MLNIGRDRLFTLQDEHRLPVSVKREYHKTTNSHRRFYWHPNPLKPGPGQATTLKPEQVWV CCCCCCCEEEEECCCCCCCEEECHHHHCCCCCCCEEEECCCCCCCCCCCCEEECCCEEEE ADMTYLPLRSGTVYLSLITDA ECEEEEEECCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA