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The map label for this gene is yfjD [H]

Identifier: 238921091

GI number: 238921091

Start: 3102606

End: 3103892

Strand: Direct

Name: yfjD [H]

Synonym: NT01EI_3226

Alternate gene names: 238921091

Gene position: 3102606-3103892 (Clockwise)

Preceding gene: 238921090

Following gene: 238921096

Centisome position: 81.38

GC content: 59.29

Gene sequence:

>1287_bases
TTGGAGCACGTCTCGACCGGTACGCTGATCGCCATTCTACTGCTGATGGTGATCGTCTCCGCTTACTTCTCCGCCTCGGA
AACCGGGATGATGACCCTCAACCGCTATCGCCTGCGCCACCTGGCCAAGCAGGGACTGCGGCCCGCCCGACGCGTCGAGC
GCCTGCTGCGTCACCCGGATCGCCTGATAAGCCTGGTGCTGATTGGCAATAACCTGGTCAATATACTGGCCTCGGCGCTG
GCAACCATCGTCGGTATGCGTCTGTATGGCGACAGCGGCGTGGCCATCGCCACCGGTATCCTGACCTTTGTCATTCTGAT
CTTTGCCGAAGTCATGCCAAAAACCTTTGCGGCGCTGTACCCGGAAAAGGTAGCATTCCCCAGTAGCCTTCTGCTGGGCC
CGCTGCAGAAGGTCATGATGCCGCTGGTCTGGCTGCTAAACGGCATCACCCGCCTGCTGCTGCGGCTGTGCGGCGTTCAG
CCGCACGCGGGCCCCAGCGATGCGGTAAGCAAGGAAGAGCTGCGCACCATCGTCAACGAGTCGCGCGCTCAGATTTCGCG
GCGTAACCAGGATATGCTGATCTCGGTACTGGATCTGGATAAGGTGTCGGTCGAGGACATCATGGTGCCGCGCACCGAGA
TCGTCGGCATCGACGTCAACGACGACTGGAAATCGATCCTGCGCCAGCTCACCCACTCTCCCCACGGGCGCATCGTGCTG
TTCCGCAATACCCTGGACGATGCCATCGGTATGCTGCGCGTACGCGAAGCATACCGCCAGATGATTGAAAAGCAGGAGTT
CAACAAAGAAAACCTGCTGCGCGCCGCTGATGAAATCTACTACATCCCTGAGGGGACCCATCTCAACGTGCAGCTGTTGA
AGTTCCAGCGCAATAAGGAAAAGGTCGGCATCGTGGTTGATGAATACGGCGATATCAAGGGGCTTATCTCCGTCGAAGAT
ATCCTTGAGGAGATCGTCGGCGATTTTACCACCTCCATGTCCCCCTCGCTGGCCGAAGAGGTACTGCCGCAGAGCGACGG
CAGCGTACTGATCGACGGCAGCGCCAATATCCGCGAACTGAACAAGGCCTTTAACTGGGCCCTGCCTGCAGAGGGCGCGC
GCACCATCAACGGGATGCTGCTGGAAACCCTGGAGGAGATCCCGCAGCCGGGCACCCAGGTCACCATCGGTAACTACTTC
ATCGAAATTCTCGATGTGCAGGACAATATGATCAAGCGGGTGAGAGTCTCTCTGCTGCGCGCTCACCTGCCAGGCGACGG
CGCCTGA

Upstream 100 bases:

>100_bases
TCATTCTGGGTCTGGCGCAGTAATCTTACGCCCTCGCACCGATTTTCGCGCCCCCGCCTTCGTGCGGGGCTGACCGTTAA
CCACCATAAGGAACACCCGT

Downstream 100 bases:

>100_bases
TCTACACGTTTAGCGCCAGATCGCGGACGTAAAAAAGCCCCACATGTTGCCTCTTCGGGGGCTTTTCTATCGATAAAGCC
CAGGTATAACGGGCCGTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MEHVSTGTLIAILLLMVIVSAYFSASETGMMTLNRYRLRHLAKQGLRPARRVERLLRHPDRLISLVLIGNNLVNILASAL
ATIVGMRLYGDSGVAIATGILTFVILIFAEVMPKTFAALYPEKVAFPSSLLLGPLQKVMMPLVWLLNGITRLLLRLCGVQ
PHAGPSDAVSKEELRTIVNESRAQISRRNQDMLISVLDLDKVSVEDIMVPRTEIVGIDVNDDWKSILRQLTHSPHGRIVL
FRNTLDDAIGMLRVREAYRQMIEKQEFNKENLLRAADEIYYIPEGTHLNVQLLKFQRNKEKVGIVVDEYGDIKGLISVED
ILEEIVGDFTTSMSPSLAEEVLPQSDGSVLIDGSANIRELNKAFNWALPAEGARTINGMLLETLEEIPQPGTQVTIGNYF
IEILDVQDNMIKRVRVSLLRAHLPGDGA

Sequences:

>Translated_428_residues
MEHVSTGTLIAILLLMVIVSAYFSASETGMMTLNRYRLRHLAKQGLRPARRVERLLRHPDRLISLVLIGNNLVNILASAL
ATIVGMRLYGDSGVAIATGILTFVILIFAEVMPKTFAALYPEKVAFPSSLLLGPLQKVMMPLVWLLNGITRLLLRLCGVQ
PHAGPSDAVSKEELRTIVNESRAQISRRNQDMLISVLDLDKVSVEDIMVPRTEIVGIDVNDDWKSILRQLTHSPHGRIVL
FRNTLDDAIGMLRVREAYRQMIEKQEFNKENLLRAADEIYYIPEGTHLNVQLLKFQRNKEKVGIVVDEYGDIKGLISVED
ILEEIVGDFTTSMSPSLAEEVLPQSDGSVLIDGSANIRELNKAFNWALPAEGARTINGMLLETLEEIPQPGTQVTIGNYF
IEILDVQDNMIKRVRVSLLRAHLPGDGA
>Mature_428_residues
MEHVSTGTLIAILLLMVIVSAYFSASETGMMTLNRYRLRHLAKQGLRPARRVERLLRHPDRLISLVLIGNNLVNILASAL
ATIVGMRLYGDSGVAIATGILTFVILIFAEVMPKTFAALYPEKVAFPSSLLLGPLQKVMMPLVWLLNGITRLLLRLCGVQ
PHAGPSDAVSKEELRTIVNESRAQISRRNQDMLISVLDLDKVSVEDIMVPRTEIVGIDVNDDWKSILRQLTHSPHGRIVL
FRNTLDDAIGMLRVREAYRQMIEKQEFNKENLLRAADEIYYIPEGTHLNVQLLKFQRNKEKVGIVVDEYGDIKGLISVED
ILEEIVGDFTTSMSPSLAEEVLPQSDGSVLIDGSANIRELNKAFNWALPAEGARTINGMLLETLEEIPQPGTQVTIGNYF
IEILDVQDNMIKRVRVSLLRAHLPGDGA

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=388, Percent_Identity=25.7731958762887, Blast_Score=136, Evalue=3e-32,
Organism=Homo sapiens, GI94681046, Length=325, Percent_Identity=24.3076923076923, Blast_Score=66, Evalue=6e-11,
Organism=Escherichia coli, GI145693175, Length=416, Percent_Identity=76.2019230769231, Blast_Score=644, Evalue=0.0,
Organism=Escherichia coli, GI1790664, Length=427, Percent_Identity=23.4192037470726, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI87082033, Length=277, Percent_Identity=27.4368231046931, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1786879, Length=260, Percent_Identity=25.7692307692308, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1788119, Length=227, Percent_Identity=27.7533039647577, Blast_Score=75, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 47718; Mature: 47718

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHVSTGTLIAILLLMVIVSAYFSASETGMMTLNRYRLRHLAKQGLRPARRVERLLRHPD
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHH
RLISLVLIGNNLVNILASALATIVGMRLYGDSGVAIATGILTFVILIFAEVMPKTFAALY
HHEEHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PEKVAFPSSLLLGPLQKVMMPLVWLLNGITRLLLRLCGVQPHAGPSDAVSKEELRTIVNE
CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
SRAQISRRNQDMLISVLDLDKVSVEDIMVPRTEIVGIDVNDDWKSILRQLTHSPHGRIVL
HHHHHHHCCHHHEEEEECCCCCCHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEE
FRNTLDDAIGMLRVREAYRQMIEKQEFNKENLLRAADEIYYIPEGTHLNVQLLKFQRNKE
EECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEECCCCCEEEEEEEEECCCCC
KVGIVVDEYGDIKGLISVEDILEEIVGDFTTSMSPSLAEEVLPQSDGSVLIDGSANIREL
CEEEEEECCCCCCHHEEHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEECCCCHHHH
NKAFNWALPAEGARTINGMLLETLEEIPQPGTQVTIGNYFIEILDVQDNMIKRVRVSLLR
HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHEEEEEECHHHHHHHHHHHHHH
AHLPGDGA
HCCCCCCC
>Mature Secondary Structure
MEHVSTGTLIAILLLMVIVSAYFSASETGMMTLNRYRLRHLAKQGLRPARRVERLLRHPD
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHH
RLISLVLIGNNLVNILASALATIVGMRLYGDSGVAIATGILTFVILIFAEVMPKTFAALY
HHEEHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PEKVAFPSSLLLGPLQKVMMPLVWLLNGITRLLLRLCGVQPHAGPSDAVSKEELRTIVNE
CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
SRAQISRRNQDMLISVLDLDKVSVEDIMVPRTEIVGIDVNDDWKSILRQLTHSPHGRIVL
HHHHHHHCCHHHEEEEECCCCCCHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEE
FRNTLDDAIGMLRVREAYRQMIEKQEFNKENLLRAADEIYYIPEGTHLNVQLLKFQRNKE
EECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEECCCCCEEEEEEEEECCCCC
KVGIVVDEYGDIKGLISVEDILEEIVGDFTTSMSPSLAEEVLPQSDGSVLIDGSANIREL
CEEEEEECCCCCCHHEEHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEECCCCHHHH
NKAFNWALPAEGARTINGMLLETLEEIPQPGTQVTIGNYFIEILDVQDNMIKRVRVSLLR
HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHEEEEEECHHHHHHHHHHHHHH
AHLPGDGA
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 3045760 [H]