| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is csiE [C]
Identifier: 238921059
GI number: 238921059
Start: 3067433
End: 3067591
Strand: Direct
Name: csiE [C]
Synonym: NT01EI_3189
Alternate gene names: 238921059
Gene position: 3067433-3067591 (Clockwise)
Preceding gene: 238921057
Following gene: 238921061
Centisome position: 80.46
GC content: 65.41
Gene sequence:
>159_bases GTGGAGCTGGCGTCTCATCCCCGCATTATTGGCGCTCCCCGCCGTGCCATCGCCGGGCTGGAGCGACGCTACCATATCCG CTTCTCCCCTGAGGAGCTGAACCTGATCGCCGTCAGTACCGGCACCTGGCTGATGCAGGCCGACGACAGGAGCGACTGA
Upstream 100 bases:
>100_bases GACTTTCCCAGCGCGAACGGCTGTAGCCCGCCGGTTCGCCCACCTTGGCGCCGCCATTGGGCGCTCGCTGTTCACCATCC GTATCGGCACGCCGCTGACG
Downstream 100 bases:
>100_bases CGTAAAAAGCCCGCGCGTAGCGGGCTCGGTAGGGCTGGCAGCCGGTCAGGCATAGACCGGAAGACGTTCACAAAGAGCCA GCACCTTCTGTTTGGTGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 52; Mature: 52
Protein sequence:
>52_residues MELASHPRIIGAPRRAIAGLERRYHIRFSPEELNLIAVSTGTWLMQADDRSD
Sequences:
>Translated_52_residues MELASHPRIIGAPRRAIAGLERRYHIRFSPEELNLIAVSTGTWLMQADDRSD >Mature_52_residues MELASHPRIIGAPRRAIAGLERRYHIRFSPEELNLIAVSTGTWLMQADDRSD
Specific function: Unknown
COG id: COG3711
COG function: function code K; Transcriptional antiterminator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5919; Mature: 5919
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELASHPRIIGAPRRAIAGLERRYHIRFSPEELNLIAVSTGTWLMQADDRSD CCCCCCCEEECCCCHHHCCCCCEEEEEECCCCEEEEEEECCCEEEECCCCCC >Mature Secondary Structure MELASHPRIIGAPRRAIAGLERRYHIRFSPEELNLIAVSTGTWLMQADDRSD CCCCCCCEEECCCCHHHCCCCCEEEEEECCCCEEEEEEECCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA