| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238921057
Identifier: 238921057
GI number: 238921057
Start: 3066738
End: 3067019
Strand: Direct
Name: 238921057
Synonym: NT01EI_3187
Alternate gene names: NA
Gene position: 3066738-3067019 (Clockwise)
Preceding gene: 238921056
Following gene: 238921059
Centisome position: 80.44
GC content: 56.38
Gene sequence:
>282_bases ATGCAGAGCGATGCCTCGCTACCTGCACCGTGCTCCTGCACGGAACGGTACTGCAATCTGGCGCATCTGTGTAAGCTGCA GCAACAAACGCCCGATGAAGCAGGGCAGAATCTGAGTCATCTGGTCAGCGATATCATGCATTACCACGCCCTGTCCCTGC ATATCAGCCGCCATGGCTATCGTCTGCACGACACGGTCTATGAGTGGTTCTCATACCTGCTGCACTGGATACAACGTGCG CGATGCTACTTCCCGGCACCGTTACGCCAGCACAACAGCTGA
Upstream 100 bases:
>100_bases ATGCCTAGACGATGTCTCCTTGATCGCCTCAGCGACGACCGACACTGTGGGATGCGCCCGATACCGATTTTGCGGTTATT CACCCGGAGGGAAAACACAC
Downstream 100 bases:
>100_bases TCGGTATCATGACGCAGTATGCCGCCATACAGCGCCGAGACGGCCAACCGAATTCACTCCTCTCCTGCTGGCTGCTACCG GCCACTACCGCTGGCTACAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MQSDASLPAPCSCTERYCNLAHLCKLQQQTPDEAGQNLSHLVSDIMHYHALSLHISRHGYRLHDTVYEWFSYLLHWIQRA RCYFPAPLRQHNS
Sequences:
>Translated_93_residues MQSDASLPAPCSCTERYCNLAHLCKLQQQTPDEAGQNLSHLVSDIMHYHALSLHISRHGYRLHDTVYEWFSYLLHWIQRA RCYFPAPLRQHNS >Mature_93_residues MQSDASLPAPCSCTERYCNLAHLCKLQQQTPDEAGQNLSHLVSDIMHYHALSLHISRHGYRLHDTVYEWFSYLLHWIQRA RCYFPAPLRQHNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10908; Mature: 10908
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSDASLPAPCSCTERYCNLAHLCKLQQQTPDEAGQNLSHLVSDIMHYHALSLHISRHGY CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCC RLHDTVYEWFSYLLHWIQRARCYFPAPLRQHNS HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MQSDASLPAPCSCTERYCNLAHLCKLQQQTPDEAGQNLSHLVSDIMHYHALSLHISRHGY CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCC RLHDTVYEWFSYLLHWIQRARCYFPAPLRQHNS HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA