Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
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Accession | NC_012779 |
Length | 3,812,315 |
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The map label for this gene is 238920994
Identifier: 238920994
GI number: 238920994
Start: 3010893
End: 3011204
Strand: Direct
Name: 238920994
Synonym: NT01EI_3124
Alternate gene names: NA
Gene position: 3010893-3011204 (Clockwise)
Preceding gene: 238920993
Following gene: 238920995
Centisome position: 78.98
GC content: 53.85
Gene sequence:
>312_bases ATGAACGTGATCCTGACCTTAAACGCCATTATCTGCCTGATGATTACCGTTCGCCTGTTCCTCTACCGCCGTGCACACGA CTCCGTTTACCGCCCACTGTATAGCTGGCTGGCCTGGTTACTGATGTGCAGCACCGCCTCGGTGACGGTGTTGATCTGCT TTAGCCTGTACCACTATGTGTTTGTCGCTGAGGCGGCGATTAATGCGGTACTACTGATTTGCCTGACTACCTCGCGCGGT AACCTCGCCAGCCTGATTATGTCACCGCGTCATCATAAGGAAGCACGCCATGACACGTACACTCACCCATGA
Upstream 100 bases:
>100_bases GTGCATTACTTTCATCCGCCCTGACCGTCAAAGTACTGCTATGGGCGATCCGCCAGATGGACAACCCCAGCCAGTTGCTG AATTTCTTAAGGGGGCGTAA
Downstream 100 bases:
>100_bases TCAACAGCAGGCCGCCGCACTGTATCTGGGCATTCCACAGGCAACATTACAGGCGGTCCAGGAGATAGAGGCTCGCACCA CGGGCTTTATGCCTGATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MNVILTLNAIICLMITVRLFLYRRAHDSVYRPLYSWLAWLLMCSTASVTVLICFSLYHYVFVAEAAINAVLLICLTTSRG NLASLIMSPRHHKEARHDTYTHP
Sequences:
>Translated_103_residues MNVILTLNAIICLMITVRLFLYRRAHDSVYRPLYSWLAWLLMCSTASVTVLICFSLYHYVFVAEAAINAVLLICLTTSRG NLASLIMSPRHHKEARHDTYTHP >Mature_103_residues MNVILTLNAIICLMITVRLFLYRRAHDSVYRPLYSWLAWLLMCSTASVTVLICFSLYHYVFVAEAAINAVLLICLTTSRG NLASLIMSPRHHKEARHDTYTHP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11811; Mature: 11811
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVILTLNAIICLMITVRLFLYRRAHDSVYRPLYSWLAWLLMCSTASVTVLICFSLYHYV CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH FVAEAAINAVLLICLTTSRGNLASLIMSPRHHKEARHDTYTHP HHHHHHHHHHHHHHEECCCCCHHHHHHCCHHHHHHCCCCCCCC >Mature Secondary Structure MNVILTLNAIICLMITVRLFLYRRAHDSVYRPLYSWLAWLLMCSTASVTVLICFSLYHYV CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH FVAEAAINAVLLICLTTSRGNLASLIMSPRHHKEARHDTYTHP HHHHHHHHHHHHHHEECCCCCHHHHHHCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA