Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238920993

Identifier: 238920993

GI number: 238920993

Start: 3010519

End: 3010896

Strand: Direct

Name: 238920993

Synonym: NT01EI_3123

Alternate gene names: NA

Gene position: 3010519-3010896 (Clockwise)

Preceding gene: 238920992

Following gene: 238920994

Centisome position: 78.97

GC content: 58.73

Gene sequence:

>378_bases
ATGAATGAATCCGTAACCGGTACCGTCGCCGCCGCCTCTGTCAGCGCTTTTTCCATCGCCACGCTGTTCCCGTCGCTACA
GGCTCCGGTGCTGTTGGGCGCACTGTGCGGCGCGCTGCTGCTGGTGATTTCACAAAAAGAGATCGGCCTGCCTTTGCGCA
TCGCGTTCTTCTGTGTGGCGTTCATCACCGGCTTGCTGACCGCCGATCTGTTCGCCGCGCTGGTTGCCGGGTATCTGCCG
CAGCACCTGACGGAAAAAGTCTCCCCCGGCTTTGGTGCATTACTTTCATCCGCCCTGACCGTCAAAGTACTGCTATGGGC
GATCCGCCAGATGGACAACCCCAGCCAGTTGCTGAATTTCTTAAGGGGGCGTAAATGA

Upstream 100 bases:

>100_bases
TGTGCGAATTGCCGCTGCGCCTGCCGCACAGTACGGCAGTTAACGTACCGGAACAAGCTCCCATAGCCGTACGTCAACGA
ATCAACCTGTGGGATTGACT

Downstream 100 bases:

>100_bases
ACGTGATCCTGACCTTAAACGCCATTATCTGCCTGATGATTACCGTTCGCCTGTTCCTCTACCGCCGTGCACACGACTCC
GTTTACCGCCCACTGTATAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MNESVTGTVAAASVSAFSIATLFPSLQAPVLLGALCGALLLVISQKEIGLPLRIAFFCVAFITGLLTADLFAALVAGYLP
QHLTEKVSPGFGALLSSALTVKVLLWAIRQMDNPSQLLNFLRGRK

Sequences:

>Translated_125_residues
MNESVTGTVAAASVSAFSIATLFPSLQAPVLLGALCGALLLVISQKEIGLPLRIAFFCVAFITGLLTADLFAALVAGYLP
QHLTEKVSPGFGALLSSALTVKVLLWAIRQMDNPSQLLNFLRGRK
>Mature_125_residues
MNESVTGTVAAASVSAFSIATLFPSLQAPVLLGALCGALLLVISQKEIGLPLRIAFFCVAFITGLLTADLFAALVAGYLP
QHLTEKVSPGFGALLSSALTVKVLLWAIRQMDNPSQLLNFLRGRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13158; Mature: 13158

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNESVTGTVAAASVSAFSIATLFPSLQAPVLLGALCGALLLVISQKEIGLPLRIAFFCVA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
FITGLLTADLFAALVAGYLPQHLTEKVSPGFGALLSSALTVKVLLWAIRQMDNPSQLLNF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LRGRK
HHCCC
>Mature Secondary Structure
MNESVTGTVAAASVSAFSIATLFPSLQAPVLLGALCGALLLVISQKEIGLPLRIAFFCVA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
FITGLLTADLFAALVAGYLPQHLTEKVSPGFGALLSSALTVKVLLWAIRQMDNPSQLLNF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LRGRK
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA