Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
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Accession | NC_012779 |
Length | 3,812,315 |
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The map label for this gene is 238920993
Identifier: 238920993
GI number: 238920993
Start: 3010519
End: 3010896
Strand: Direct
Name: 238920993
Synonym: NT01EI_3123
Alternate gene names: NA
Gene position: 3010519-3010896 (Clockwise)
Preceding gene: 238920992
Following gene: 238920994
Centisome position: 78.97
GC content: 58.73
Gene sequence:
>378_bases ATGAATGAATCCGTAACCGGTACCGTCGCCGCCGCCTCTGTCAGCGCTTTTTCCATCGCCACGCTGTTCCCGTCGCTACA GGCTCCGGTGCTGTTGGGCGCACTGTGCGGCGCGCTGCTGCTGGTGATTTCACAAAAAGAGATCGGCCTGCCTTTGCGCA TCGCGTTCTTCTGTGTGGCGTTCATCACCGGCTTGCTGACCGCCGATCTGTTCGCCGCGCTGGTTGCCGGGTATCTGCCG CAGCACCTGACGGAAAAAGTCTCCCCCGGCTTTGGTGCATTACTTTCATCCGCCCTGACCGTCAAAGTACTGCTATGGGC GATCCGCCAGATGGACAACCCCAGCCAGTTGCTGAATTTCTTAAGGGGGCGTAAATGA
Upstream 100 bases:
>100_bases TGTGCGAATTGCCGCTGCGCCTGCCGCACAGTACGGCAGTTAACGTACCGGAACAAGCTCCCATAGCCGTACGTCAACGA ATCAACCTGTGGGATTGACT
Downstream 100 bases:
>100_bases ACGTGATCCTGACCTTAAACGCCATTATCTGCCTGATGATTACCGTTCGCCTGTTCCTCTACCGCCGTGCACACGACTCC GTTTACCGCCCACTGTATAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MNESVTGTVAAASVSAFSIATLFPSLQAPVLLGALCGALLLVISQKEIGLPLRIAFFCVAFITGLLTADLFAALVAGYLP QHLTEKVSPGFGALLSSALTVKVLLWAIRQMDNPSQLLNFLRGRK
Sequences:
>Translated_125_residues MNESVTGTVAAASVSAFSIATLFPSLQAPVLLGALCGALLLVISQKEIGLPLRIAFFCVAFITGLLTADLFAALVAGYLP QHLTEKVSPGFGALLSSALTVKVLLWAIRQMDNPSQLLNFLRGRK >Mature_125_residues MNESVTGTVAAASVSAFSIATLFPSLQAPVLLGALCGALLLVISQKEIGLPLRIAFFCVAFITGLLTADLFAALVAGYLP QHLTEKVSPGFGALLSSALTVKVLLWAIRQMDNPSQLLNFLRGRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13158; Mature: 13158
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNESVTGTVAAASVSAFSIATLFPSLQAPVLLGALCGALLLVISQKEIGLPLRIAFFCVA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH FITGLLTADLFAALVAGYLPQHLTEKVSPGFGALLSSALTVKVLLWAIRQMDNPSQLLNF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LRGRK HHCCC >Mature Secondary Structure MNESVTGTVAAASVSAFSIATLFPSLQAPVLLGALCGALLLVISQKEIGLPLRIAFFCVA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH FITGLLTADLFAALVAGYLPQHLTEKVSPGFGALLSSALTVKVLLWAIRQMDNPSQLLNF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LRGRK HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA