Click here to switch to the map view.

The map label for this gene is 238920995

Identifier: 238920995

GI number: 238920995

Start: 3011182

End: 3011772

Strand: Direct

Name: 238920995

Synonym: NT01EI_3125

Alternate gene names: NA

Gene position: 3011182-3011772 (Clockwise)

Preceding gene: 238920994

Following gene: 238920996

Centisome position: 78.99

GC content: 50.93

Gene sequence:

>591_bases
ATGACACGTACACTCACCCATGATCAACAGCAGGCCGCCGCACTGTATCTGGGCATTCCACAGGCAACATTACAGGCGGT
CCAGGAGATAGAGGCTCGCACCACGGGCTTTATGCCTGATGGCCGTCCAGTTGTTTTGTTTGAGCGCCATATCATGTTCC
GTCAGTTAAAAAAACACGGTCTGGATGCTGATCAACTGATGCAACAGTTCCCGGATCTGGTAAACGAGAAAGCAGGCGGC
TGGCAGGGCAGCAACCGTGAACACTATCGCCTGAATCTAGCCAAACAAATACATATCAATTCTGCCATTGAGAGTACCAG
TTGGGGACTGTTCCAGATTATGGGTTTCCATTGGGAAACGCTGGGTTACCGTTCTGCCGTTGATTTTGAGCTCCAGATGA
ACGAAAGCGAACAGATGCAGCTTGACGCCTTTGTCCGCTTTGTCGACGCCAACCCGAAAATCCACGACGCATTGAAGAGG
CAAAACTGGCCAGAATTCGCCCGCCGCTATAACGGGCCACAGTACAAGCGTAATCAGTACGACGTGAAGCTGGCTGCCGC
ATTTGAGAAATTCAGTAAGGCAGTAGCATAA

Upstream 100 bases:

>100_bases
GAGGCGGCGATTAATGCGGTACTACTGATTTGCCTGACTACCTCGCGCGGTAACCTCGCCAGCCTGATTATGTCACCGCG
TCATCATAAGGAAGCACGCC

Downstream 100 bases:

>100_bases
TGTGCTGGATTAAAATCTCACGCCACTGCTGCAAACCGAAAACGCATGGCACCCGTGCACCGCACAGGTACATATGATTC
TCCACTGTCAGGAGCATACT

Product: hypothetical protein

Products: NA

Alternate protein names: Phage-Related Cell Wall Hydrolase; Bacteriophage-Acquired Protein; Lytic Transglycosylase Catalytic; Phage-Like Protein; DNA-Directed RNA Polymerase Beta Chain; Lytic Phage PhiCTX_orf; Gp43 Bacteriophage-Acquired Protein

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MTRTLTHDQQQAAALYLGIPQATLQAVQEIEARTTGFMPDGRPVVLFERHIMFRQLKKHGLDADQLMQQFPDLVNEKAGG
WQGSNREHYRLNLAKQIHINSAIESTSWGLFQIMGFHWETLGYRSAVDFELQMNESEQMQLDAFVRFVDANPKIHDALKR
QNWPEFARRYNGPQYKRNQYDVKLAAAFEKFSKAVA

Sequences:

>Translated_196_residues
MTRTLTHDQQQAAALYLGIPQATLQAVQEIEARTTGFMPDGRPVVLFERHIMFRQLKKHGLDADQLMQQFPDLVNEKAGG
WQGSNREHYRLNLAKQIHINSAIESTSWGLFQIMGFHWETLGYRSAVDFELQMNESEQMQLDAFVRFVDANPKIHDALKR
QNWPEFARRYNGPQYKRNQYDVKLAAAFEKFSKAVA
>Mature_195_residues
TRTLTHDQQQAAALYLGIPQATLQAVQEIEARTTGFMPDGRPVVLFERHIMFRQLKKHGLDADQLMQQFPDLVNEKAGGW
QGSNREHYRLNLAKQIHINSAIESTSWGLFQIMGFHWETLGYRSAVDFELQMNESEQMQLDAFVRFVDANPKIHDALKRQ
NWPEFARRYNGPQYKRNQYDVKLAAAFEKFSKAVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22729; Mature: 22598

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTLTHDQQQAAALYLGIPQATLQAVQEIEARTTGFMPDGRPVVLFERHIMFRQLKKHG
CCCCCCCCHHHHHHHEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHC
LDADQLMQQFPDLVNEKAGGWQGSNREHYRLNLAKQIHINSAIESTSWGLFQIMGFHWET
CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHEEHHHHHCCCCCHHHHHHHHHHHH
LGYRSAVDFELQMNESEQMQLDAFVRFVDANPKIHDALKRQNWPEFARRYNGPQYKRNQY
CCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCH
DVKLAAAFEKFSKAVA
HHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TRTLTHDQQQAAALYLGIPQATLQAVQEIEARTTGFMPDGRPVVLFERHIMFRQLKKHG
CCCCCCCHHHHHHHEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHC
LDADQLMQQFPDLVNEKAGGWQGSNREHYRLNLAKQIHINSAIESTSWGLFQIMGFHWET
CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHEEHHHHHCCCCCHHHHHHHHHHHH
LGYRSAVDFELQMNESEQMQLDAFVRFVDANPKIHDALKRQNWPEFARRYNGPQYKRNQY
CCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCH
DVKLAAAFEKFSKAVA
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA