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The map label for this gene is ybeD [C]

Identifier: 238920820

GI number: 238920820

Start: 2835217

End: 2835480

Strand: Direct

Name: ybeD [C]

Synonym: NT01EI_2946

Alternate gene names: 238920820

Gene position: 2835217-2835480 (Clockwise)

Preceding gene: 238920819

Following gene: 238920821

Centisome position: 74.37

GC content: 50.76

Gene sequence:

>264_bases
ATGAAAACCAAACTGAATGAACTGCTCGAATTCCCGTGCGAGTTTACCTATAAAGTCATGGGACTGGCACAGCCTGAGTT
GGTTGATCAGGTTGTTGAAGTGGTACAGCGCCATGCGCCGGGTGACTACACCCCGCAGGTTAAGCCGAGCAGCAAAGGGA
ACTACCACTCCGTTTCCATCACCATCAATGCGACCCACATTGAGCAGGTTGAGACGCTGTATGAAGAGCTGGGCAACATT
GAAATCGTGCGCATGGTTCTGTAA

Upstream 100 bases:

>100_bases
CTCTTGAAAAGGGCATCGACGGCCCCATTTAATCGGTAAGTAAGGCTCCCGCTACGGCGGGAGTTATAATTTGTAGATAG
TGCAATACGCTGGAGCTCAC

Downstream 100 bases:

>100_bases
TCACAGTTAATTAACTAAAATACAGCATTTATCGCGGCCCGGTATGGCGTTACAGCTTGCCGGGCCGTACTTTTTTGCCG
ATTCGGCACTGGTGAGTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MKTKLNELLEFPCEFTYKVMGLAQPELVDQVVEVVQRHAPGDYTPQVKPSSKGNYHSVSITINATHIEQVETLYEELGNI
EIVRMVL

Sequences:

>Translated_87_residues
MKTKLNELLEFPCEFTYKVMGLAQPELVDQVVEVVQRHAPGDYTPQVKPSSKGNYHSVSITINATHIEQVETLYEELGNI
EIVRMVL
>Mature_87_residues
MKTKLNELLEFPCEFTYKVMGLAQPELVDQVVEVVQRHAPGDYTPQVKPSSKGNYHSVSITINATHIEQVETLYEELGNI
EIVRMVL

Specific function: Unknown

COG id: COG2921

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0250 family [H]

Homologues:

Organism=Escherichia coli, GI1786850, Length=87, Percent_Identity=91.9540229885057, Blast_Score=162, Evalue=3e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007454 [H]

Pfam domain/function: PF04359 DUF493 [H]

EC number: NA

Molecular weight: Translated: 9889; Mature: 9889

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKLNELLEFPCEFTYKVMGLAQPELVDQVVEVVQRHAPGDYTPQVKPSSKGNYHSVSI
CCCCHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE
TINATHIEQVETLYEELGNIEIVRMVL
EEEHHHHHHHHHHHHHHCCEEEEEEEC
>Mature Secondary Structure
MKTKLNELLEFPCEFTYKVMGLAQPELVDQVVEVVQRHAPGDYTPQVKPSSKGNYHSVSI
CCCCHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE
TINATHIEQVETLYEELGNIEIVRMVL
EEEHHHHHHHHHHHHHHCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]