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The map label for this gene is yqjH [H]

Identifier: 238896595

GI number: 238896595

Start: 4576728

End: 4577504

Strand: Reverse

Name: yqjH [H]

Synonym: KP1_4796

Alternate gene names: 238896595

Gene position: 4577504-4576728 (Counterclockwise)

Preceding gene: 238896598

Following gene: 238896589

Centisome position: 87.22

GC content: 62.03

Gene sequence:

>777_bases
ATGATGACAAAAACCAAAGCAGACAAGTACCCGCAGCGTGTCCGCAATGAGCTGCGTTTCCGTGAGCTGACGGTGCTGCG
CGTGGAGCGCGCAGGCGCGGCGTTCCAGCGTATCGTGCTGGGAGGCGAGGCGCTGGAAGGCTTCGCCTCTCACGGCTTTG
ACGACCATACCAAGCTTTTTTTCCCCGAGCCGGGCGCGGCATTTACCCCGCCGCAGGTGACCGAGGAGGGGATTGACTGG
GGGGAAGGCGTGCGGCCTGCCACCCGCGACTATACGCCGCTGTACGATGCCGAACGTCACGAGCTGGCTTACGATTTCTA
TATCCACGATGGCGGTATCGCCAGCCGTTGGGCGCTGGAAGCAAAAGTGGGCGATAAGCTGGTGATCGGCGGCCCGCGCG
GCTCGCTGGTGGTGCCGGAAGATTATGCCTGGCAGCTGTATGTTTGCGATGAGTCCGGCATGCCGGCGCTGCGCCGTCGT
CTGCTGGGATTACGCCAGCTGCCGGCGAGGCCGCAGGTGACGGCCATCGTTACTATCGCCGATGCGTCGTATAAAGATTA
TCTGGCGGATCTCGACGGCTTTAACATCGAGTGGGTGGTGGGCCACAATCCGGCCTTCGTCGCCGAGCGTCTGGCGCAGG
TGAAGGTGCCGGCGGAGGATTATTTTATCTGGCTGACCGGCGAAGGCGCGGTGGTGAAATCGCTGCTGGCGCGCTTTGAA
GACGAGAGCATCGATCAGCAGCTGGTGCGTTCCCAGGCGTACTGGCACAGCAAGTAA

Upstream 100 bases:

>100_bases
TTGACTATATCAAAAAAAGACTTGCATTCTTATTAGTTGGCAATCATTATCATTTGCATCAAGTTTAGATATATCTATTT
ACCGTTCACGAAGGCAATCG

Downstream 100 bases:

>100_bases
AAAGCCATCGTGGTAAAACCCGGATAGCGGCGCGTCGCGCCTTATCCGGGCTACCGGCGGTGCCGTTTTTTGTCGGGTGG
CGGCTTACGCCTTACCCGAC

Product: putative FAD-linked/NADP-linked ferredoxin reductase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MMTKTKADKYPQRVRNELRFRELTVLRVERAGAAFQRIVLGGEALEGFASHGFDDHTKLFFPEPGAAFTPPQVTEEGIDW
GEGVRPATRDYTPLYDAERHELAYDFYIHDGGIASRWALEAKVGDKLVIGGPRGSLVVPEDYAWQLYVCDESGMPALRRR
LLGLRQLPARPQVTAIVTIADASYKDYLADLDGFNIEWVVGHNPAFVAERLAQVKVPAEDYFIWLTGEGAVVKSLLARFE
DESIDQQLVRSQAYWHSK

Sequences:

>Translated_258_residues
MMTKTKADKYPQRVRNELRFRELTVLRVERAGAAFQRIVLGGEALEGFASHGFDDHTKLFFPEPGAAFTPPQVTEEGIDW
GEGVRPATRDYTPLYDAERHELAYDFYIHDGGIASRWALEAKVGDKLVIGGPRGSLVVPEDYAWQLYVCDESGMPALRRR
LLGLRQLPARPQVTAIVTIADASYKDYLADLDGFNIEWVVGHNPAFVAERLAQVKVPAEDYFIWLTGEGAVVKSLLARFE
DESIDQQLVRSQAYWHSK
>Mature_258_residues
MMTKTKADKYPQRVRNELRFRELTVLRVERAGAAFQRIVLGGEALEGFASHGFDDHTKLFFPEPGAAFTPPQVTEEGIDW
GEGVRPATRDYTPLYDAERHELAYDFYIHDGGIASRWALEAKVGDKLVIGGPRGSLVVPEDYAWQLYVCDESGMPALRRR
LLGLRQLPARPQVTAIVTIADASYKDYLADLDGFNIEWVVGHNPAFVAERLAQVKVPAEDYFIWLTGEGAVVKSLLARFE
DESIDQQLVRSQAYWHSK

Specific function: Unknown

COG id: COG2375

COG function: function code P; Siderophore-interacting protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To Vibrio vibriobactin/vulbinactin utilization protein viuB [H]

Homologues:

Organism=Escherichia coli, GI1789450, Length=250, Percent_Identity=69.6, Blast_Score=364, Evalue=1e-102,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013113
- InterPro:   IPR017927
- InterPro:   IPR017938
- InterPro:   IPR007037 [H]

Pfam domain/function: PF08021 FAD_binding_9; PF04954 SIP [H]

EC number: NA

Molecular weight: Translated: 29072; Mature: 29072

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTKTKADKYPQRVRNELRFRELTVLRVERAGAAFQRIVLGGEALEGFASHGFDDHTKLF
CCCCCCCHHHHHHHHHHHHHHHHEEEEEHHHCHHHHHHHHCCHHHHHHHHCCCCCCCEEE
FPEPGAAFTPPQVTEEGIDWGEGVRPATRDYTPLYDAERHELAYDFYIHDGGIASRWALE
ECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEE
AKVGDKLVIGGPRGSLVVPEDYAWQLYVCDESGMPALRRRLLGLRQLPARPQVTAIVTIA
ECCCCEEEEECCCCCEEECCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEEE
DASYKDYLADLDGFNIEWVVGHNPAFVAERLAQVKVPAEDYFIWLTGEGAVVKSLLARFE
CCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCC
DESIDQQLVRSQAYWHSK
CCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMTKTKADKYPQRVRNELRFRELTVLRVERAGAAFQRIVLGGEALEGFASHGFDDHTKLF
CCCCCCCHHHHHHHHHHHHHHHHEEEEEHHHCHHHHHHHHCCHHHHHHHHCCCCCCCEEE
FPEPGAAFTPPQVTEEGIDWGEGVRPATRDYTPLYDAERHELAYDFYIHDGGIASRWALE
ECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEE
AKVGDKLVIGGPRGSLVVPEDYAWQLYVCDESGMPALRRRLLGLRQLPARPQVTAIVTIA
ECCCCEEEEECCCCCEEECCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEEE
DASYKDYLADLDGFNIEWVVGHNPAFVAERLAQVKVPAEDYFIWLTGEGAVVKSLLARFE
CCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCC
DESIDQQLVRSQAYWHSK
CCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]