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The map label for this gene is ytfF [H]

Identifier: 238892688

GI number: 238892688

Start: 473974

End: 474963

Strand: Reverse

Name: ytfF [H]

Synonym: KP1_0478

Alternate gene names: 238892688

Gene position: 474963-473974 (Counterclockwise)

Preceding gene: 238892689

Following gene: 238892687

Centisome position: 9.05

GC content: 64.44

Gene sequence:

>990_bases
ATGACAACGGATGCAATGATGATTAGTGGTGTGTTATACGCCCTGCTGGCGGGGCTGATGTGGGGTTTAATTTTCGTCGG
GCCTTTGCTGGTGCCAGAGTATCCGGCGATGCTGCAGTCGATGGGACGCTATCTGGCGCTGGGCCTGATCGCCCTGCCGC
TGGCGTGGCTCGGGCGCGCGCGACTGCGCCAGTTGAGCCGGCACGACTGGTGGACCGCGCTGGGCCTGACAATGATGGGG
AACCTTATCTATTACGTCTGCCTGGCCAGCGCCATTCAGCGCACCGGGGCGCCGGTTTCCACCATGATTATCGGCACGCT
GCCGGTGGTACTGCCGGTGTTCGCCAATCTGCTCTACAGCCAGCGCGACGGGAAGCTGCCGTGGCGGCGCCTGTTTCCGG
CGCTGATCTGCATCGCTGTGGGCCTGATCTGCGTTAACGTCGCGGAGCTGCGTCAGGGGCTGCCGAATTTTAGCCCGTGG
CGCTACGGCTCCGGCATTGCGCTGGCGCTGGGATCGGTGGTCTGCTGGGCCTGGTATGCTCTGCGCAACGCCCGCTGGCT
GCGGGAGAACCCGCATCAACCGCCAATGATGTGGGCTACCGCTCAGGCGCTGGTGACGCTTCCGGTTTCGCTGGCCGGCT
ATCTCTCCGCCTGCGCCTGGCTGCACGGTCAGCAGGCCGGGTTTCCCCTGCCCTTCGGCCCGCGTCCGGCGGTGTTTATT
ACGCTGATGCTGGCCATCGCGGTGCTCTGCTCATGGGTCGGCGCGCTATGCTGGAATATTGCCAGCCAGCGGCTGCCGAC
GGTGATCCTCGGCCCGCTTATCGTCTTCGAAACCCTGGCCGGACTGCTGTATACCTTCCTGCTGCGGCAAAGCTTACCGC
CGCTGCTGACCCTGAGCGGCATCCTGCTGCTGGTGCTCGGCGTGGTCTCCGCCGTACGCGCCAGACCGGAAAAACCGATG
CTGCAGCCGCTGGCGGACGAAAAAAAGTAG

Upstream 100 bases:

>100_bases
CATTACGCCGGTGCGCTATCAGAAGCAGGTCGCCAGGCTCTAATGCGCAATCTCATACAATATTCCTGCCCGGCCCCCTT
CTACACTGCAGACAACGGTA

Downstream 100 bases:

>100_bases
CCTCGCCTCCTTAAGGGGTATTCCCTCACCCAAAAGATGCATTTAAAATACATCTTATATTCCTGATGACGAGGTAACTG
CTATGGCTTTCCGTGACCAA

Product: putative cationic amino acid transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MTTDAMMISGVLYALLAGLMWGLIFVGPLLVPEYPAMLQSMGRYLALGLIALPLAWLGRARLRQLSRHDWWTALGLTMMG
NLIYYVCLASAIQRTGAPVSTMIIGTLPVVLPVFANLLYSQRDGKLPWRRLFPALICIAVGLICVNVAELRQGLPNFSPW
RYGSGIALALGSVVCWAWYALRNARWLRENPHQPPMMWATAQALVTLPVSLAGYLSACAWLHGQQAGFPLPFGPRPAVFI
TLMLAIAVLCSWVGALCWNIASQRLPTVILGPLIVFETLAGLLYTFLLRQSLPPLLTLSGILLLVLGVVSAVRARPEKPM
LQPLADEKK

Sequences:

>Translated_329_residues
MTTDAMMISGVLYALLAGLMWGLIFVGPLLVPEYPAMLQSMGRYLALGLIALPLAWLGRARLRQLSRHDWWTALGLTMMG
NLIYYVCLASAIQRTGAPVSTMIIGTLPVVLPVFANLLYSQRDGKLPWRRLFPALICIAVGLICVNVAELRQGLPNFSPW
RYGSGIALALGSVVCWAWYALRNARWLRENPHQPPMMWATAQALVTLPVSLAGYLSACAWLHGQQAGFPLPFGPRPAVFI
TLMLAIAVLCSWVGALCWNIASQRLPTVILGPLIVFETLAGLLYTFLLRQSLPPLLTLSGILLLVLGVVSAVRARPEKPM
LQPLADEKK
>Mature_328_residues
TTDAMMISGVLYALLAGLMWGLIFVGPLLVPEYPAMLQSMGRYLALGLIALPLAWLGRARLRQLSRHDWWTALGLTMMGN
LIYYVCLASAIQRTGAPVSTMIIGTLPVVLPVFANLLYSQRDGKLPWRRLFPALICIAVGLICVNVAELRQGLPNFSPWR
YGSGIALALGSVVCWAWYALRNARWLRENPHQPPMMWATAQALVTLPVSLAGYLSACAWLHGQQAGFPLPFGPRPAVFIT
LMLAIAVLCSWVGALCWNIASQRLPTVILGPLIVFETLAGLLYTFLLRQSLPPLLTLSGILLLVLGVVSAVRARPEKPML
QPLADEKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

Organism=Escherichia coli, GI226510990, Length=321, Percent_Identity=81.9314641744548, Blast_Score=517, Evalue=1e-148,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 36052; Mature: 35921

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTDAMMISGVLYALLAGLMWGLIFVGPLLVPEYPAMLQSMGRYLALGLIALPLAWLGRA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLRQLSRHDWWTALGLTMMGNLIYYVCLASAIQRTGAPVSTMIIGTLPVVLPVFANLLYS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
QRDGKLPWRRLFPALICIAVGLICVNVAELRQGLPNFSPWRYGSGIALALGSVVCWAWYA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LRNARWLRENPHQPPMMWATAQALVTLPVSLAGYLSACAWLHGQQAGFPLPFGPRPAVFI
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
TLMLAIAVLCSWVGALCWNIASQRLPTVILGPLIVFETLAGLLYTFLLRQSLPPLLTLSG
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ILLLVLGVVSAVRARPEKPMLQPLADEKK
HHHHHHHHHHHHHCCCCCCCHHCCCCCCC
>Mature Secondary Structure 
TTDAMMISGVLYALLAGLMWGLIFVGPLLVPEYPAMLQSMGRYLALGLIALPLAWLGRA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH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HHHHHHHHHHHHHCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]