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The map label for this gene is ytfE [C]

Identifier: 238892687

GI number: 238892687

Start: 473229

End: 473891

Strand: Reverse

Name: ytfE [C]

Synonym: KP1_0477

Alternate gene names: 238892687

Gene position: 473891-473229 (Counterclockwise)

Preceding gene: 238892688

Following gene: 238892684

Centisome position: 9.03

GC content: 59.43

Gene sequence:

>663_bases
ATGGCTTTCCGTGACCAACCTTTAGGCGAGCTGGCGCTGACCATCCCGCGCGCCTCCGCCCTGTTCCGTCAATACGATAT
GGATTACTGCTGCGGCGGCAAACAGACCCTGGCGCGCGCCGCGTCGCGCAAAGCGCTGGATGTCGCGGTGATTGAAGCCG
AGCTGGCGAAACTGGCCGAACAGCCTCTCTCCCGCGACTGGCGCGCGGCGCCCCTCGCGGAGATTATCGACCATATCATC
GTTCGCTATCACGACCGGCACCGTGAACAGCTGCCGGAGCTGATCCTGCAGGCCACCAAGGTTGAACGCGTCCATGCCGA
TAAACCGAACGTGCCGAAAGGACTGACTAAGTACCTGACCATGCTGCATCAGGAGCTTTCCAGCCACATGATGAAAGAGG
AGCAGATCCTGTTCCCGATGATCAAACAGGGAATGGGCGCCCAGGCCGGGGGGCCGATCAGCGTGATGGAAAGCGAGCAT
GATGAAGCGGGCGAACTGCTGGAAGTCATTAAGCACATCACCCACAACGTGACGCCGCCGCCGGAAGCCTGCACCACCTG
GAAGGCGATGTATAACGGTATCAACGAGATGATCGACGATCTGATGGAACACATCAGCCTGGAAAATAATGTGCTGTTCC
CGCGCGCCCTCGGCGGAAAGTAA

Upstream 100 bases:

>100_bases
GCGGACGAAAAAAAGTAGCCTCGCCTCCTTAAGGGGTATTCCCTCACCCAAAAGATGCATTTAAAATACATCTTATATTC
CTGATGACGAGGTAACTGCT

Downstream 100 bases:

>100_bases
AGAAAAAGGCGCCCGCGGGCGCCCTCGGCGGAAAGTAAAGAAAAAGGCGCCCGCGGGCGCCCTCGACATTGTCCGTCTTA
TTTGGCCACTCCGGGTGGCC

Product: iron-sulfur cluster repair di-iron protein

Products: NA

Alternate protein names: RCMNS [H]

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MAFRDQPLGELALTIPRASALFRQYDMDYCCGGKQTLARAASRKALDVAVIEAELAKLAEQPLSRDWRAAPLAEIIDHII
VRYHDRHREQLPELILQATKVERVHADKPNVPKGLTKYLTMLHQELSSHMMKEEQILFPMIKQGMGAQAGGPISVMESEH
DEAGELLEVIKHITHNVTPPPEACTTWKAMYNGINEMIDDLMEHISLENNVLFPRALGGK

Sequences:

>Translated_220_residues
MAFRDQPLGELALTIPRASALFRQYDMDYCCGGKQTLARAASRKALDVAVIEAELAKLAEQPLSRDWRAAPLAEIIDHII
VRYHDRHREQLPELILQATKVERVHADKPNVPKGLTKYLTMLHQELSSHMMKEEQILFPMIKQGMGAQAGGPISVMESEH
DEAGELLEVIKHITHNVTPPPEACTTWKAMYNGINEMIDDLMEHISLENNVLFPRALGGK
>Mature_219_residues
AFRDQPLGELALTIPRASALFRQYDMDYCCGGKQTLARAASRKALDVAVIEAELAKLAEQPLSRDWRAAPLAEIIDHIIV
RYHDRHREQLPELILQATKVERVHADKPNVPKGLTKYLTMLHQELSSHMMKEEQILFPMIKQGMGAQAGGPISVMESEHD
EAGELLEVIKHITHNVTPPPEACTTWKAMYNGINEMIDDLMEHISLENNVLFPRALGGK

Specific function: Involved in anaerobic NO protection [H]

COG id: COG2846

COG function: function code D; Regulator of cell morphogenesis and NO signaling

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790654, Length=220, Percent_Identity=90.9090909090909, Blast_Score=424, Evalue=1e-120,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007500
- InterPro:   IPR019903
- InterPro:   IPR012312 [H]

Pfam domain/function: PF01814 Hemerythrin; PF04405 ScdA_N [H]

EC number: NA

Molecular weight: Translated: 24739; Mature: 24608

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFRDQPLGELALTIPRASALFRQYDMDYCCGGKQTLARAASRKALDVAVIEAELAKLAE
CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QPLSRDWRAAPLAEIIDHIIVRYHDRHREQLPELILQATKVERVHADKPNVPKGLTKYLT
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
MLHQELSSHMMKEEQILFPMIKQGMGAQAGGPISVMESEHDEAGELLEVIKHITHNVTPP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCC
PEACTTWKAMYNGINEMIDDLMEHISLENNVLFPRALGGK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCC
>Mature Secondary Structure 
AFRDQPLGELALTIPRASALFRQYDMDYCCGGKQTLARAASRKALDVAVIEAELAKLAE
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QPLSRDWRAAPLAEIIDHIIVRYHDRHREQLPELILQATKVERVHADKPNVPKGLTKYLT
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
MLHQELSSHMMKEEQILFPMIKQGMGAQAGGPISVMESEHDEAGELLEVIKHITHNVTPP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCC
PEACTTWKAMYNGINEMIDDLMEHISLENNVLFPRALGGK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA