Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238028349
Identifier: 238028349
GI number: 238028349
Start: 3190009
End: 3190671
Strand: Reverse
Name: 238028349
Synonym: bglu_1g28100
Alternate gene names: NA
Gene position: 3190671-3190009 (Counterclockwise)
Preceding gene: 238028350
Following gene: 238028344
Centisome position: 81.68
GC content: 69.53
Gene sequence:
>663_bases ATGACGGTGATCGTGGTGGCAAATCCGAAGGGCGGCGTCGGCAAGAGCACGCTGTCCACCAATCTGGCGGGCTATTTCGC GGCGCAGGGCGCCTGGGTGGCGCTCGCCGATCTCGACCGGCAGCAGTCCTCGCACGGCTGGCTCGGCCTGCGGCCCGCCA CGCTGCCGCCGATCGAGGCCTGGGCGCTCGATCCCGGCAATCCCGCCAAGCCGCCGCGCGGCCTCGAATATGCCGTGATC GACACGCCGGCCGGCCTGCACGGCAACCGGCTCGACGTCGCGCTCGATCTGGCCGACAAGGTGATCGTGCCGCTGCAGCC CTCGATGTTCGACATCCTCGCCACCCAGCATTTTCTCGAGCGCCTCGCGAGCGAGAAGGCGGTGCGCAAGGGCACGGTGC AGATCGGCATCGTCGGGATGCGGGTGGATGCGCGCACACGCTCGGCCGAGCAACTGCAGCGTTTCGTCGAGGGGCTGAAG CTGCCGGTGCTCGGCTACCTGCGCGACACGCAGAACTACGTGCAGGTGGCCGCGCACGGCCTGACGCTCTGGGACGTCGC GAGAAGCCGCGTCGAGAAGGATCTCGAGCAGTGGCAGCCGATCGTCGAGTGGGCGCAGGCCAGGCCCGCGAAAGGCGAGG GCAGGGGCGAGGCGAAGAGCTGA
Upstream 100 bases:
>100_bases CTCGTTCCGGTGCGATGCATTTTGCCGATATCATCGATCCCTGTATCCGCAATCTCGCGGCGCCGGCCGATCGGCGCCGC ACGGCTTTCCGGGGGCGTAC
Downstream 100 bases:
>100_bases CGCCGGAGCGCGCGTCTTGCCGCGCGGGCGCCGCGCCGGCCGTTGGCCGGAACGGCCCTAGGGAGCCGCCTCCGGGGGAC CATCACCAACGGGCCGCCTA
Product: Cobyrinic acid a,c-diamide synthase
Products: NA
Alternate protein names: Partition-Related Protein; Cobyrinic Acid Ac-Diamide Synthase; Partition Protein; ParA Family Protein; Chromosome Partitioning ATPase; Chromosome Partitioning Protein ParA; Partition-Like Protein; Plasmid Partition Protein ParA; ParA Partitioning Protein; Partitioning Protein; Partitioning Protein ParA; Plasmid Partitioning Protein ParA; Chromosome Partitioning-Related ATPase; ParA Partitioning-Like Protein; Partition Protein ParA; Plasmid Partitioning Protein
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MTVIVVANPKGGVGKSTLSTNLAGYFAAQGAWVALADLDRQQSSHGWLGLRPATLPPIEAWALDPGNPAKPPRGLEYAVI DTPAGLHGNRLDVALDLADKVIVPLQPSMFDILATQHFLERLASEKAVRKGTVQIGIVGMRVDARTRSAEQLQRFVEGLK LPVLGYLRDTQNYVQVAAHGLTLWDVARSRVEKDLEQWQPIVEWAQARPAKGEGRGEAKS
Sequences:
>Translated_220_residues MTVIVVANPKGGVGKSTLSTNLAGYFAAQGAWVALADLDRQQSSHGWLGLRPATLPPIEAWALDPGNPAKPPRGLEYAVI DTPAGLHGNRLDVALDLADKVIVPLQPSMFDILATQHFLERLASEKAVRKGTVQIGIVGMRVDARTRSAEQLQRFVEGLK LPVLGYLRDTQNYVQVAAHGLTLWDVARSRVEKDLEQWQPIVEWAQARPAKGEGRGEAKS >Mature_219_residues TVIVVANPKGGVGKSTLSTNLAGYFAAQGAWVALADLDRQQSSHGWLGLRPATLPPIEAWALDPGNPAKPPRGLEYAVID TPAGLHGNRLDVALDLADKVIVPLQPSMFDILATQHFLERLASEKAVRKGTVQIGIVGMRVDARTRSAEQLQRFVEGLKL PVLGYLRDTQNYVQVAAHGLTLWDVARSRVEKDLEQWQPIVEWAQARPAKGEGRGEAKS
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23913; Mature: 23781
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVIVVANPKGGVGKSTLSTNLAGYFAAQGAWVALADLDRQQSSHGWLGLRPATLPPIEA CEEEEEECCCCCCCCHHHHHHHHHHEECCCCEEEEECCCCCCCCCCEEEECCCCCCCCCE WALDPGNPAKPPRGLEYAVIDTPAGLHGNRLDVALDLADKVIVPLQPSMFDILATQHFLE EEECCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCEEEECCCCHHHHHHHHHHHHH RLASEKAVRKGTVQIGIVGMRVDARTRSAEQLQRFVEGLKLPVLGYLRDTQNYVQVAAHG HHHHHHHHHCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC LTLWDVARSRVEKDLEQWQPIVEWAQARPAKGEGRGEAKS CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TVIVVANPKGGVGKSTLSTNLAGYFAAQGAWVALADLDRQQSSHGWLGLRPATLPPIEA EEEEEECCCCCCCCHHHHHHHHHHEECCCCEEEEECCCCCCCCCCEEEECCCCCCCCCE WALDPGNPAKPPRGLEYAVIDTPAGLHGNRLDVALDLADKVIVPLQPSMFDILATQHFLE EEECCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCEEEECCCCHHHHHHHHHHHHH RLASEKAVRKGTVQIGIVGMRVDARTRSAEQLQRFVEGLKLPVLGYLRDTQNYVQVAAHG HHHHHHHHHCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC LTLWDVARSRVEKDLEQWQPIVEWAQARPAKGEGRGEAKS CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA