Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238028350
Identifier: 238028350
GI number: 238028350
Start: 3190874
End: 3191302
Strand: Reverse
Name: 238028350
Synonym: bglu_1g28110
Alternate gene names: NA
Gene position: 3191302-3190874 (Counterclockwise)
Preceding gene: 238028351
Following gene: 238028349
Centisome position: 81.69
GC content: 72.73
Gene sequence:
>429_bases ATGAACCCCAACCGTTCTGCCGAACTGGGCGCCACCCTGCTGCGCGTGGTGCTCGGCCTGCTGTATCTGATCCATGCCGC CCAGAAGATATTCGTCTTCACGCTGCCCGGCACCGCGCAGTTCTTCGCGTCGATGGGCCTGCCGGGCTGGCTCGCCTACC TGACCACCGCGGTCGAACTGGCCGGCGGCCTCGCGCTGCTGTCGGGGGTCCAGGTACGGGCCGCCGCGCTGGTGCTGCTG CCGTTCATGCTCGGCGCCGCGCACGCCCACTATCCGAACGGCTTCGGCTTCGCCTCGCCGCACGGCGGCTGGGAATATCC GGGGTTCTGGGCGGTCGCGCTGGTCGTGCAGGCGCTGGTCGGCGCCGGAGCCTACGCGCTCGGCGGCCGCAGCGCCGGGC CGCGGGCCGGCGCGCGCGCCGCGACTTGA
Upstream 100 bases:
>100_bases TCATTCTCATTGGGAAGTAATGTAAGCCGTTTCGGCGACTTATCGAGGCATCCGGCTTCGAATACAGTTTGCTGCCTTCC CTTTCGAACCGGAGTCGACG
Downstream 100 bases:
>100_bases TGCGGCGTGGCGCAGAAATATTGCAATTTGCCTTCGATCGAGGCGCGCGCCAGCCGGCGCGCCGCGTCCGCTGCCCGGCC GTCGCCGCGTCGACTTGCGC
Product: DoxX family protein
Products: NA
Alternate protein names: DoxD-Like Family Protein; Oxidoreductase CatD; DoxD-Like Protein; Surfeit Locus 4-Related
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MNPNRSAELGATLLRVVLGLLYLIHAAQKIFVFTLPGTAQFFASMGLPGWLAYLTTAVELAGGLALLSGVQVRAAALVLL PFMLGAAHAHYPNGFGFASPHGGWEYPGFWAVALVVQALVGAGAYALGGRSAGPRAGARAAT
Sequences:
>Translated_142_residues MNPNRSAELGATLLRVVLGLLYLIHAAQKIFVFTLPGTAQFFASMGLPGWLAYLTTAVELAGGLALLSGVQVRAAALVLL PFMLGAAHAHYPNGFGFASPHGGWEYPGFWAVALVVQALVGAGAYALGGRSAGPRAGARAAT >Mature_142_residues MNPNRSAELGATLLRVVLGLLYLIHAAQKIFVFTLPGTAQFFASMGLPGWLAYLTTAVELAGGLALLSGVQVRAAALVLL PFMLGAAHAHYPNGFGFASPHGGWEYPGFWAVALVVQALVGAGAYALGGRSAGPRAGARAAT
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14576; Mature: 14576
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPNRSAELGATLLRVVLGLLYLIHAAQKIFVFTLPGTAQFFASMGLPGWLAYLTTAVEL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHCCCHHHHHHHHHHHHH AGGLALLSGVQVRAAALVLLPFMLGAAHAHYPNGFGFASPHGGWEYPGFWAVALVVQALV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH GAGAYALGGRSAGPRAGARAAT CCCCHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MNPNRSAELGATLLRVVLGLLYLIHAAQKIFVFTLPGTAQFFASMGLPGWLAYLTTAVEL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHCCCHHHHHHHHHHHHH AGGLALLSGVQVRAAALVLLPFMLGAAHAHYPNGFGFASPHGGWEYPGFWAVALVVQALV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH GAGAYALGGRSAGPRAGARAAT CCCCHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA