Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238028336
Identifier: 238028336
GI number: 238028336
Start: 3171784
End: 3172491
Strand: Reverse
Name: 238028336
Synonym: bglu_1g27970
Alternate gene names: NA
Gene position: 3172491-3171784 (Counterclockwise)
Preceding gene: 238028337
Following gene: 238028332
Centisome position: 81.21
GC content: 73.16
Gene sequence:
>708_bases ATGCGCAGCGGCGGTGCGCTGGCCGCGGCGGTGCTGGCCCTGGCGGGCTTCGCCGGCGCGGCCGCGCCGGCACGTGCGGA GGTCGCGGCGGCCGATCCGATCGACGTCGGCATGCGGCAGTGCCTGGCGCGGCGCGACCGCTCGTCGACGGTCGGCCAGA TCCAGTGCATGGACGAGGCGCGCGCCAAGTGGCTGGCGGCCGTGGACGATGCGTTCGCGCAGCTGAACACGGTCGCGCCG GCGGCCGCGAAGCGCGGCTGGCAGGAAAGCCAGCGGCGCTGGCAGCTCTGGCGCAAGGACGAGACGCTGCTCGCGCAGGC CGTCTATGCGACCACCAGTGGCACGATGTACGCGATGGCGAGCGCCGACATGCGGATTCAGCCGGTGCGCGACCGCGCGC TGTCGCTGCGCGACGCGGCCGATCGCTACGCCAAGCCGGGCGGCGCGGCCGACGCCGTGCATCGCGTGCGGGCCTGTTCG GACGACGCGGCCTGCGAGCACGCGCTGTTCGACCTGAACCGCTACTACGTGAAGTTGCAAAAGCGCATGCCGTCGCGCTC GCGGCCGACCCTGGTGCGCGCCCAGCGCGCCTGGGTGGCGTTCCGCGACGCGACCACGCCGATGATCAGCGAGCAGCAGC GCGTCGACCTGATCGGCGCGCGCGTGGCGACGCTGAAGCGGTTCTCGGAGACGGTGAACAACAAGTAG
Upstream 100 bases:
>100_bases TCCATACCGACGTCCACGGCCTCGTCGCCGAGGAACTGAACGGGCGCGTCGAGTACTACGTCGACTGCGTGCGCGACTGA CGATGGCACGGTTCGGGACG
Downstream 100 bases:
>100_bases CGTCGGTGACGCGCGCGGTCCACAAGCCCCAAAAAAAACGGACGCCTCGGCGTCCGTTTTTCCTGGCTGCCCAGCCGGCC GGCTGGGCATGGTGTCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MRSGGALAAAVLALAGFAGAAAPARAEVAAADPIDVGMRQCLARRDRSSTVGQIQCMDEARAKWLAAVDDAFAQLNTVAP AAAKRGWQESQRRWQLWRKDETLLAQAVYATTSGTMYAMASADMRIQPVRDRALSLRDAADRYAKPGGAADAVHRVRACS DDAACEHALFDLNRYYVKLQKRMPSRSRPTLVRAQRAWVAFRDATTPMISEQQRVDLIGARVATLKRFSETVNNK
Sequences:
>Translated_235_residues MRSGGALAAAVLALAGFAGAAAPARAEVAAADPIDVGMRQCLARRDRSSTVGQIQCMDEARAKWLAAVDDAFAQLNTVAP AAAKRGWQESQRRWQLWRKDETLLAQAVYATTSGTMYAMASADMRIQPVRDRALSLRDAADRYAKPGGAADAVHRVRACS DDAACEHALFDLNRYYVKLQKRMPSRSRPTLVRAQRAWVAFRDATTPMISEQQRVDLIGARVATLKRFSETVNNK >Mature_235_residues MRSGGALAAAVLALAGFAGAAAPARAEVAAADPIDVGMRQCLARRDRSSTVGQIQCMDEARAKWLAAVDDAFAQLNTVAP AAAKRGWQESQRRWQLWRKDETLLAQAVYATTSGTMYAMASADMRIQPVRDRALSLRDAADRYAKPGGAADAVHRVRACS DDAACEHALFDLNRYYVKLQKRMPSRSRPTLVRAQRAWVAFRDATTPMISEQQRVDLIGARVATLKRFSETVNNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25739; Mature: 25739
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSGGALAAAVLALAGFAGAAAPARAEVAAADPIDVGMRQCLARRDRSSTVGQIQCMDEA CCCCHHHHHHHHHHHHHCCCCCCCCCHHCCCCCHHHHHHHHHHHCCCCCCCHHEEEHHHH RAKWLAAVDDAFAQLNTVAPAAAKRGWQESQRRWQLWRKDETLLAQAVYATTSGTMYAMA HHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEE SADMRIQPVRDRALSLRDAADRYAKPGGAADAVHRVRACSDDAACEHALFDLNRYYVKLQ CCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH KRMPSRSRPTLVRAQRAWVAFRDATTPMISEQQRVDLIGARVATLKRFSETVNNK HHCCCCCCCHHHHHHHHHHEECCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRSGGALAAAVLALAGFAGAAAPARAEVAAADPIDVGMRQCLARRDRSSTVGQIQCMDEA CCCCHHHHHHHHHHHHHCCCCCCCCCHHCCCCCHHHHHHHHHHHCCCCCCCHHEEEHHHH RAKWLAAVDDAFAQLNTVAPAAAKRGWQESQRRWQLWRKDETLLAQAVYATTSGTMYAMA HHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEE SADMRIQPVRDRALSLRDAADRYAKPGGAADAVHRVRACSDDAACEHALFDLNRYYVKLQ CCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH KRMPSRSRPTLVRAQRAWVAFRDATTPMISEQQRVDLIGARVATLKRFSETVNNK HHCCCCCCCHHHHHHHHHHEECCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA