| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238028255
Identifier: 238028255
GI number: 238028255
Start: 3084720
End: 3084926
Strand: Reverse
Name: 238028255
Synonym: bglu_1g27090
Alternate gene names: NA
Gene position: 3084926-3084720 (Counterclockwise)
Preceding gene: 238028256
Following gene: 238028254
Centisome position: 78.97
GC content: 60.87
Gene sequence:
>207_bases ATGGCGAAGATTTTAAGAACGTCTGAGGGGGACGTGCTCGATACCTTGTGCTATCGGGCGTACGGAACGCTGCAGGGCAC GGTAGAGGCTGTTTACGAGGCGAATCCCGGCCTTGCCGCGAGACCGCAGCCGTTCGCCTCGGGCGTCGAGATTGTCATGC CGGATATCGAGGCGCCGCGCGACGAAACCGTGTCGCTTTGGACATAG
Upstream 100 bases:
>100_bases CTGGGCCGCTGGCTGCTGCAGACGATCGAGGAGGAGCAGGACGCCATGCTGGCCGATGGTCTGCCCCGCAAGCAATCCTT CACTGTGGAGTTTGGCCGCT
Downstream 100 bases:
>100_bases CGAGGCGCGATGGAAGCGATCTTTCAGATTATCGCGAACGGCGACGACGTCACCAAGGTGATTCAGGACCGGGTCATGGA GATCCGGACCGTCGACAAGC
Product: phage tail X family protein
Products: NA
Alternate protein names: Phage Tail X Family Protein; P2-Like Prophage Tail Protein X; Pyocin R2_PP Tail Component Protein; Prophage; Phage Tail Protein X; Phage Tail X Protein; Tail Protein X-Related Protein
Number of amino acids: Translated: 68; Mature: 67
Protein sequence:
>68_residues MAKILRTSEGDVLDTLCYRAYGTLQGTVEAVYEANPGLAARPQPFASGVEIVMPDIEAPRDETVSLWT
Sequences:
>Translated_68_residues MAKILRTSEGDVLDTLCYRAYGTLQGTVEAVYEANPGLAARPQPFASGVEIVMPDIEAPRDETVSLWT >Mature_67_residues AKILRTSEGDVLDTLCYRAYGTLQGTVEAVYEANPGLAARPQPFASGVEIVMPDIEAPRDETVSLWT
Specific function: Unknown
COG id: COG5004
COG function: function code R; P2-like prophage tail protein X
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7385; Mature: 7254
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKILRTSEGDVLDTLCYRAYGTLQGTVEAVYEANPGLAARPQPFASGVEIVMPDIEAPR CCCCCCCCCCCHHHHHHHHHHCCCCCHHHEEEECCCCCCCCCCCCCCCCEEEECCCCCCC DETVSLWT CCEEEECC >Mature Secondary Structure AKILRTSEGDVLDTLCYRAYGTLQGTVEAVYEANPGLAARPQPFASGVEIVMPDIEAPR CCCCCCCCCCHHHHHHHHHHCCCCCHHHEEEECCCCCCCCCCCCCCCCEEEECCCCCCC DETVSLWT CCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA