Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238028256

Identifier: 238028256

GI number: 238028256

Start: 3084901

End: 3085779

Strand: Reverse

Name: 238028256

Synonym: bglu_1g27100

Alternate gene names: NA

Gene position: 3085779-3084901 (Counterclockwise)

Preceding gene: 238028257

Following gene: 238028255

Centisome position: 78.99

GC content: 65.64

Gene sequence:

>879_bases
ATGGACCTGATCAGACAGATCACGTCGGCCGCGACGCAGGCGAGTGTCGCCTCGGAGCGCGTCCGGCAGATGGTGCGCGT
CGCCGATCGCAACCGGGCCGCGAGCGCGACAACGGTCGAGACGTTGCAAAAGCTCGCGACCGGCAATCTCAGCAGCGCGG
CCGAGTTGCTGACCGGTGCCAAGAGCGCGATGTCAGTCGCTGGTGATCTGTTCCCCCAAGTCGGGATCGTGACGCGCAGC
TTCAACGCCACGCAGGCGTCGGTCGGCTCGATCCTGAAGATGGCGGACAGTTCGAGCTTTCCGCTCGTTCGCTCGGCCGC
CGATAGCGTCAAATCGGCACTTGGCGGGGCAGTGAACCAGTTCTCGAGCTTGGTCGGCATCAAGGACAAGGCGGCGGCCG
ACGCGGACAAGGCGACGAGCCTGAGTTCGTTGTTACCAGGGCTGGCCGATGGTGCGACGTCGAGCACGCCGCACTTGATG
ACGATGGCGGCCGACGACGGCAGCGCGTTCCATTTCAACCTGTCCACGGCCGCGTTCGAGAAGCTTCGGCGGGCGACGCG
ATACCGCGTCGCCACGCAGGAGCGCTTGAACCGGCAGGAGGCGTTGCAGCCGGTCAGCGAGGGCGGCGAGACGATCACCT
TGTCCGGCGTCGTCTTCCCCACCCTGGGTGCCGGCACGACGCAGATCAGCAAGCTGCGTGCGATCGGCAGCCGCATGAAG
CCGGTGCGGCTCACGACGGGCAGCGGCGAAGTGCTGGGCCGCTGGCTGCTGCAGACGATCGAGGAGGAGCAGGACGCCAT
GCTGGCCGATGGTCTGCCCCGCAAGCAATCCTTCACTGTGGAGTTTGGCCGCTATGGCGAAGATTTTAAGAACGTCTGA

Upstream 100 bases:

>100_bases
GCGGGTCAGTCCGACGTTGACGCGGATGATGGCCGAGCAGCAGCGCAAGACAACCAACTTTTCGGCGATGTTTGATGCGC
CGCATCTATGAGGGTAAAGC

Downstream 100 bases:

>100_bases
GGGGGACGTGCTCGATACCTTGTGCTATCGGGCGTACGGAACGCTGCAGGGCACGGTAGAGGCTGTTTACGAGGCGAATC
CCGGCCTTGCCGCGAGACCG

Product: phage P2 GpU family protein

Products: NA

Alternate protein names: Phage-Related Tail Protein; Phage P2 GpU; Phage P2 GpU Family Protein; Phage Tail Protein; Pyocin R2_PP Tail Formation Protein; Phage Protein U; Phage Tail Protein U; Bacteriophage P2 Phage-Related Tail U Protein; Pyocin R2_PP Tail Formation Protein GpU; Tail Fiber Protein; Phage Tail; Tail Protein

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MDLIRQITSAATQASVASERVRQMVRVADRNRAASATTVETLQKLATGNLSSAAELLTGAKSAMSVAGDLFPQVGIVTRS
FNATQASVGSILKMADSSSFPLVRSAADSVKSALGGAVNQFSSLVGIKDKAAADADKATSLSSLLPGLADGATSSTPHLM
TMAADDGSAFHFNLSTAAFEKLRRATRYRVATQERLNRQEALQPVSEGGETITLSGVVFPTLGAGTTQISKLRAIGSRMK
PVRLTTGSGEVLGRWLLQTIEEEQDAMLADGLPRKQSFTVEFGRYGEDFKNV

Sequences:

>Translated_292_residues
MDLIRQITSAATQASVASERVRQMVRVADRNRAASATTVETLQKLATGNLSSAAELLTGAKSAMSVAGDLFPQVGIVTRS
FNATQASVGSILKMADSSSFPLVRSAADSVKSALGGAVNQFSSLVGIKDKAAADADKATSLSSLLPGLADGATSSTPHLM
TMAADDGSAFHFNLSTAAFEKLRRATRYRVATQERLNRQEALQPVSEGGETITLSGVVFPTLGAGTTQISKLRAIGSRMK
PVRLTTGSGEVLGRWLLQTIEEEQDAMLADGLPRKQSFTVEFGRYGEDFKNV
>Mature_292_residues
MDLIRQITSAATQASVASERVRQMVRVADRNRAASATTVETLQKLATGNLSSAAELLTGAKSAMSVAGDLFPQVGIVTRS
FNATQASVGSILKMADSSSFPLVRSAADSVKSALGGAVNQFSSLVGIKDKAAADADKATSLSSLLPGLADGATSSTPHLM
TMAADDGSAFHFNLSTAAFEKLRRATRYRVATQERLNRQEALQPVSEGGETITLSGVVFPTLGAGTTQISKLRAIGSRMK
PVRLTTGSGEVLGRWLLQTIEEEQDAMLADGLPRKQSFTVEFGRYGEDFKNV

Specific function: Unknown

COG id: COG3499

COG function: function code R; Phage protein U

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30775; Mature: 30775

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLIRQITSAATQASVASERVRQMVRVADRNRAASATTVETLQKLATGNLSSAAELLTGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
KSAMSVAGDLFPQVGIVTRSFNATQASVGSILKMADSSSFPLVRSAADSVKSALGGAVNQ
HHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
FSSLVGIKDKAAADADKATSLSSLLPGLADGATSSTPHLMTMAADDGSAFHFNLSTAAFE
HHHHHCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEECHHHHHH
KLRRATRYRVATQERLNRQEALQPVSEGGETITLSGVVFPTLGAGTTQISKLRAIGSRMK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEECCCCCHHHHHHHHHHHHCCC
PVRLTTGSGEVLGRWLLQTIEEEQDAMLADGLPRKQSFTVEFGRYGEDFKNV
CEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHCCC
>Mature Secondary Structure
MDLIRQITSAATQASVASERVRQMVRVADRNRAASATTVETLQKLATGNLSSAAELLTGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
KSAMSVAGDLFPQVGIVTRSFNATQASVGSILKMADSSSFPLVRSAADSVKSALGGAVNQ
HHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
FSSLVGIKDKAAADADKATSLSSLLPGLADGATSSTPHLMTMAADDGSAFHFNLSTAAFE
HHHHHCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEECHHHHHH
KLRRATRYRVATQERLNRQEALQPVSEGGETITLSGVVFPTLGAGTTQISKLRAIGSRMK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEECCCCCHHHHHHHHHHHHCCC
PVRLTTGSGEVLGRWLLQTIEEEQDAMLADGLPRKQSFTVEFGRYGEDFKNV
CEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA