Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238028254

Identifier: 238028254

GI number: 238028254

Start: 3083661

End: 3084710

Strand: Reverse

Name: 238028254

Synonym: bglu_1g27080

Alternate gene names: NA

Gene position: 3084710-3083661 (Counterclockwise)

Preceding gene: 238028255

Following gene: 238028253

Centisome position: 78.96

GC content: 65.24

Gene sequence:

>1050_bases
ATGGAAGCGATCTTTCAGATTATCGCGAACGGCGACGACGTCACCAAGGTGATTCAGGACCGGGTCATGGAGATCCGGAC
CGTCGACAAGCCTGGCCTGGATGCGGACGAATGCACGATCACGCTCGACGATCGCGACGGCCGGATCCGATTCCCGCCCA
AGGGCGCGACGGTCAAGGTGTCGCTGGGATGGGAGGGGCAGGGGCTGTCGATGCTGGGCGAGTATGCCGTCGACGAGGTC
GGGCTGCGTGGGCCGCCGGCCAGCGTGGTGTTTCGCGGCAAGCCTGCGAACATGCGGGCGACGTCGAAGACGCAGCGCTA
CGGGAGCTGGTCGAACGTGCGGCTGGCCGACATCGTCGGCGATGTCGCGCGACGCAACAAGTGGTCGGCCGCGTGCGATG
TCAACGTGGTGGTGCCTCGGATCGACCAGTTTGGCGAAAGCGATCTGCATTTCGTGACGCGACTCGCCCGGCAGTATGGA
GCGACGGCGACGGTCAAGGCCGGCAAGCTGATCGTGCTGCCCCGAGGCGGCGGCAAGAGCGCGAGCGGCAAGCCGTTGCC
GGTGGTGACCCTGACGCCCGAGCTGCTGCTCGACTATGACATCAATTTCCCCGATCGCGCGAGCTTCGCGGCGGTCCGCA
CCAAGGTCCACGATCGCAAGACGGGGAGGAAAATCGATCTGACGATTCCCAATCCGGATGCGCCGCAAGGGGCGGCCGCG
GTTCATACCGAGCGGCACGCCTTCGCCAGTCCGCAGGCGGCGAAGGCGGCCGCCACGTCGAGGCTCGAAACGCTCAATCG
GCACACGTCGGCGAGCCGCCTGACGATGCGCGGCCGGGCGGACCTGTCCGCCGAAAAGACGATCGCGCTGAAAGGGTTCA
AAGAGGGAGTCGACGGAGAGTTTCTGATCGAGGCGGTCGAGCACACGTTCGCCTCGCGGGGCTGGATCACGGTGGTGACG
TTGAATGGAGGAAACAAGGGCAAGGCGAAGGTGGGGCACAAGAAGAAGTCGGGCAAGAAAATCGATCTGGTGGTGCCGGC
GCCGACGTAA

Upstream 100 bases:

>100_bases
CGCGAGACCGCAGCCGTTCGCCTCGGGCGTCGAGATTGTCATGCCGGATATCGAGGCGCCGCGCGACGAAACCGTGTCGC
TTTGGACATAGCGAGGCGCG

Downstream 100 bases:

>100_bases
CGCGCCACACGAGAACGATGCAGGCCGCTCACGGGCAACCGGAGCGGCCTTTCTTTTTTCAACGGGGGTGGGATGGGTGA
CGAGAAGCAGGAGGGGCTGG

Product: phage late control D family protein

Products: NA

Alternate protein names: Phage Late Control D Family Protein; Phage Late Control D; Phage Late Control Gene D Protein; Bacteriophage Regulatory Protein; Tail Protein D; Phage-Related Tail Protein; Phage Protein D; Late Control Gene D Protein; Regulator Of Late Gene Expression; Bacteriophage Protein; Pyocin R2_PP Tail Formation; Prophage Tail Protein; Fels-2 Prophage Protein; Phage Late Control; Phage Protein; Gene D Protein; Phage Tail Protein; Phage-Related Late Control Gene Protein; Phage Late Control D Protein; Phage Tail Protein D; Pyocin R2_PP Tail Formation GPD; Cytoplasmic Protein; Phage Late Control Gene D Protein GpD; Gene Late Control D Protein; Bacteriophage P2 GpD Protein; Bacteriophage Late Gene Regulator; Bacteriophage Late Control D Protein; Bacteriophage-Related Tail D Protein; Prophage; Bacteriophage P2 Tail Protein GPD; Phage-Like Protein; Control Protein For Phage Late Genes Expression; Phage Regulator; Phage Protein D-Like; Regulator Of Late Phage Gene Expression; Phage Late Control Gene D Protein-Like Protein; Phage Late Control Gene D Protein GPD; Late Control Gene D Protein Prophage; Bacteriophage Late Gene Control Protein D; Bacteriophage Tail Protein D; Late Gene Regulator

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MEAIFQIIANGDDVTKVIQDRVMEIRTVDKPGLDADECTITLDDRDGRIRFPPKGATVKVSLGWEGQGLSMLGEYAVDEV
GLRGPPASVVFRGKPANMRATSKTQRYGSWSNVRLADIVGDVARRNKWSAACDVNVVVPRIDQFGESDLHFVTRLARQYG
ATATVKAGKLIVLPRGGGKSASGKPLPVVTLTPELLLDYDINFPDRASFAAVRTKVHDRKTGRKIDLTIPNPDAPQGAAA
VHTERHAFASPQAAKAAATSRLETLNRHTSASRLTMRGRADLSAEKTIALKGFKEGVDGEFLIEAVEHTFASRGWITVVT
LNGGNKGKAKVGHKKKSGKKIDLVVPAPT

Sequences:

>Translated_349_residues
MEAIFQIIANGDDVTKVIQDRVMEIRTVDKPGLDADECTITLDDRDGRIRFPPKGATVKVSLGWEGQGLSMLGEYAVDEV
GLRGPPASVVFRGKPANMRATSKTQRYGSWSNVRLADIVGDVARRNKWSAACDVNVVVPRIDQFGESDLHFVTRLARQYG
ATATVKAGKLIVLPRGGGKSASGKPLPVVTLTPELLLDYDINFPDRASFAAVRTKVHDRKTGRKIDLTIPNPDAPQGAAA
VHTERHAFASPQAAKAAATSRLETLNRHTSASRLTMRGRADLSAEKTIALKGFKEGVDGEFLIEAVEHTFASRGWITVVT
LNGGNKGKAKVGHKKKSGKKIDLVVPAPT
>Mature_349_residues
MEAIFQIIANGDDVTKVIQDRVMEIRTVDKPGLDADECTITLDDRDGRIRFPPKGATVKVSLGWEGQGLSMLGEYAVDEV
GLRGPPASVVFRGKPANMRATSKTQRYGSWSNVRLADIVGDVARRNKWSAACDVNVVVPRIDQFGESDLHFVTRLARQYG
ATATVKAGKLIVLPRGGGKSASGKPLPVVTLTPELLLDYDINFPDRASFAAVRTKVHDRKTGRKIDLTIPNPDAPQGAAA
VHTERHAFASPQAAKAAATSRLETLNRHTSASRLTMRGRADLSAEKTIALKGFKEGVDGEFLIEAVEHTFASRGWITVVT
LNGGNKGKAKVGHKKKSGKKIDLVVPAPT

Specific function: Unknown

COG id: COG3500

COG function: function code R; Phage protein D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37637; Mature: 37637

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAIFQIIANGDDVTKVIQDRVMEIRTVDKPGLDADECTITLDDRDGRIRFPPKGATVKV
CHHHHEECCCCCHHHHHHHHHHHHEEECCCCCCCCCCEEEEEECCCCEEEECCCCCEEEE
SLGWEGQGLSMLGEYAVDEVGLRGPPASVVFRGKPANMRATSKTQRYGSWSNVRLADIVG
EECCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHH
DVARRNKWSAACDVNVVVPRIDQFGESDLHFVTRLARQYGATATVKAGKLIVLPRGGGKS
HHHHCCCCCCEEEEEEEECCHHHCCCCHHHHHHHHHHHHCCEEEEECCEEEEEECCCCCC
ASGKPLPVVTLTPELLLDYDINFPDRASFAAVRTKVHDRKTGRKIDLTIPNPDAPQGAAA
CCCCCEEEEEECHHHEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEE
VHTERHAFASPQAAKAAATSRLETLNRHTSASRLTMRGRADLSAEKTIALKGFKEGVDGE
EECCHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEECCCCCCCHH
FLIEAVEHTFASRGWITVVTLNGGNKGKAKVGHKKKSGKKIDLVVPAPT
HHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCC
>Mature Secondary Structure
MEAIFQIIANGDDVTKVIQDRVMEIRTVDKPGLDADECTITLDDRDGRIRFPPKGATVKV
CHHHHEECCCCCHHHHHHHHHHHHEEECCCCCCCCCCEEEEEECCCCEEEECCCCCEEEE
SLGWEGQGLSMLGEYAVDEVGLRGPPASVVFRGKPANMRATSKTQRYGSWSNVRLADIVG
EECCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHH
DVARRNKWSAACDVNVVVPRIDQFGESDLHFVTRLARQYGATATVKAGKLIVLPRGGGKS
HHHHCCCCCCEEEEEEEECCHHHCCCCHHHHHHHHHHHHCCEEEEECCEEEEEECCCCCC
ASGKPLPVVTLTPELLLDYDINFPDRASFAAVRTKVHDRKTGRKIDLTIPNPDAPQGAAA
CCCCCEEEEEECHHHEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEE
VHTERHAFASPQAAKAAATSRLETLNRHTSASRLTMRGRADLSAEKTIALKGFKEGVDGE
EECCHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEECCCCCCCHH
FLIEAVEHTFASRGWITVVTLNGGNKGKAKVGHKKKSGKKIDLVVPAPT
HHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA