| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028237
Identifier: 238028237
GI number: 238028237
Start: 3065065
End: 3065523
Strand: Reverse
Name: 238028237
Synonym: bglu_1g26910
Alternate gene names: NA
Gene position: 3065523-3065065 (Counterclockwise)
Preceding gene: 238028238
Following gene: 238028230
Centisome position: 78.47
GC content: 69.93
Gene sequence:
>459_bases ATGTCCCACGCCATCGCCGTCGCGCTGTTCCTTCACCTTCTCGCCGTCGCGGTGTGGGTGGGCGGAATGGTGTTCGCGCA TTTCTGCCTGCGCCCCGCGCTGTCGGATCTCTCGCCGCAGCTGCGGCTGCCGCTCGTGGAGGCCGTATTCGGCCGCTTCT TCAACTGGGTGGCGGGCGCCGTGATCGTCACGCTGCTCACGGGCGGCTACCTGCTCACGGCGTTCGGCGGCGCGCACGCG AACTGGCCGCTGCATGCGATGGCCGGCTGCGGCGTGCTGATGATGCTGATCTTCGGCCACATCCGCTTCGCGATCTTCCC GCGCATCCGCCGCGCCGTGCAGGCGCAGAACTGGCCGGACGGCGCGCGCGCCGTGGCGGCGATGCGCATGCTGGTGATGG TGAACCTCGTGCTCGGCGTCGTGACGATCGCCGTCGCGGTGCTCTCGCGCGGCTTCTGA
Upstream 100 bases:
>100_bases CTCGCGGCGGTCGAACCCGGTCATGCCGCAGCCGTTGCGTCGCCGTTCGCGGCGAGGCCGCCGCGCTTCCTTCCATCACG ACACCCCACAGGATTTGCTC
Downstream 100 bases:
>100_bases TGCGCGCCGCGCGCGGTGCCGGCGGCATCCGGCACGGTTGGCCGGCTTGCCCCGTAGCGCGGCATCGCGCGGGGCCGCGC CGCGCTCAATGCGCCGCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MSHAIAVALFLHLLAVAVWVGGMVFAHFCLRPALSDLSPQLRLPLVEAVFGRFFNWVAGAVIVTLLTGGYLLTAFGGAHA NWPLHAMAGCGVLMMLIFGHIRFAIFPRIRRAVQAQNWPDGARAVAAMRMLVMVNLVLGVVTIAVAVLSRGF
Sequences:
>Translated_152_residues MSHAIAVALFLHLLAVAVWVGGMVFAHFCLRPALSDLSPQLRLPLVEAVFGRFFNWVAGAVIVTLLTGGYLLTAFGGAHA NWPLHAMAGCGVLMMLIFGHIRFAIFPRIRRAVQAQNWPDGARAVAAMRMLVMVNLVLGVVTIAVAVLSRGF >Mature_151_residues SHAIAVALFLHLLAVAVWVGGMVFAHFCLRPALSDLSPQLRLPLVEAVFGRFFNWVAGAVIVTLLTGGYLLTAFGGAHAN WPLHAMAGCGVLMMLIFGHIRFAIFPRIRRAVQAQNWPDGARAVAAMRMLVMVNLVLGVVTIAVAVLSRGF
Specific function: Unknown
COG id: COG5615
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16377; Mature: 16246
Theoretical pI: Translated: 12.13; Mature: 12.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHAIAVALFLHLLAVAVWVGGMVFAHFCLRPALSDLSPQLRLPLVEAVFGRFFNWVAGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH VIVTLLTGGYLLTAFGGAHANWPLHAMAGCGVLMMLIFGHIRFAIFPRIRRAVQAQNWPD HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GARAVAAMRMLVMVNLVLGVVTIAVAVLSRGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SHAIAVALFLHLLAVAVWVGGMVFAHFCLRPALSDLSPQLRLPLVEAVFGRFFNWVAGA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH VIVTLLTGGYLLTAFGGAHANWPLHAMAGCGVLMMLIFGHIRFAIFPRIRRAVQAQNWPD HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GARAVAAMRMLVMVNLVLGVVTIAVAVLSRGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA