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The map label for this gene is yisV [H]

Identifier: 238028230

GI number: 238028230

Start: 3054401

End: 3055894

Strand: Reverse

Name: yisV [H]

Synonym: bglu_1g26830

Alternate gene names: 238028230

Gene position: 3055894-3054401 (Counterclockwise)

Preceding gene: 238028237

Following gene: 238028229

Centisome position: 78.23

GC content: 71.69

Gene sequence:

>1494_bases
ATGTCCACCGTTCCGCTCGACCAGATTCCCGCGCCGCACGACACGGCCACGCTGACCCTCGTCGACCAGCTCGTGCAATG
GGCGCGGCGGCGCATCGACGAGCGGGTGTTCCGGCCCGGCATGCGCATGCCGTCGATCCGCAAGCTCGCGGTGGACAAGA
ACGTCTCGCGCTTCACGGTGGTGGAGGCCTACGAGCGGCTCGTCGCGCAGGGCTACCTCGATTCGCGGCGCGGCTCCGGC
TTCTACGTGCGCGAGCGCACCCCCGCGGCGCTGCCGGGCGAGGCCGCGCGGCGCGCCGGCGGGGCGCCGCCCATGCCGGT
CGACAATCCGATCGACGTGGTCTGGCTGCTGCGCAACATGCTGCACACGGTCAGCCCGGAAAAGGGGCCGGGGCTCGGCT
ACCTGCCGGCGCGCTGGCTCGACGGCGAATTGATCACCAGCGCGCTGCGCGCGCTCGGCCGCCAGACCGGCGCGCAGATG
CTCGGGCTCGGCAGCGCGCAGGGCTTCCTGCCGCTGCGCCAGCAGCTGCAGACGCGGCTCGCCGAGTTCGAGGTCGGCGC
CACTCCGGAGCAGATCGTGCTGGTGTCCGGCGTCACGCATGCGATCGACCTGATCGCGCGGCTCTACGTGCGCCCGGGCG
ATGCCGTGATCGTCGGCGATCCGGCCTGGTTCCAGATGTTCGGGCGTTTCGCCTCGCAGGGCGCGCGGCTGGTCGGCATG
CCGTACACGCCCGACGGTCCCGATCTCGACGCGCTCGAGGCGCTGGTCCAGCAGTGGCGGCCCAAGATGCTGGTGATCAA
CTCGGTGCTGCACAACCCCACCGGCACCTCGCTGTCGGCCGCCCAGGCGTTCCGCATCCTGCGGCTCGCCGAGGCCTACG
ATTTCCTGGTGGTCGAGGACGACATCTACGGCGATCTCTGCCCGGCCCGCTATCCGGCCACGCGGCTCGCGAGCCTCGAC
CAGTTGAAGCGCGTGATCCTGCTCGGCAGCTTCTCCAAGACGCTCGCGGCCAACCTGCGGGTGGGCTACATCGCTTGCTC
GCGCGAGGTCGCCGACGCGCTGACGGATCAGAAGATGCTGGCCGGCATGGCCACCCCCGAACTCAACGAGCGCGTGCTGT
ACAAGGTGCTGACCGACGGCCATTACCGGCGCCACGTCGAGCGGCTGCGCGGGCGGCTCGACGGCGTGCGCGACAAGACC
GCGAGGATGCTCGAGCGCGTCGGCCTGCGCCTTTTCACGACGCCGGCGGCCGGCATGTTCCTGTGGGCCGACACCGGCGC
CGACGCCGACGCGCTGGCCGCCGCGGCGCACGAGGCCGGCTTTCTGCTGACGCCGGGCAGCCTGTTCTCGCCGCAGCAGT
CGCCGTCCACCTGGACGCGCTTCAACGTCGCGAATTGCGGTGATCCGGCGCTGGCCACGTTTCTCGCGCGCTATCTCGAC
GCGGTGCCGCGGCGCGCCGCGGAAGGCGAGCGCCGCGGGTTCGACGCGGCCTAG

Upstream 100 bases:

>100_bases
CGCCCGTATCTTGGCGGCCTGGAAACTGTAATCGCGCGGACCGGAACAGTAACGGTACAATCGACTCGATAGCTTTCTGT
ACAGTTCTCAAGGGGCCGCG

Downstream 100 bases:

>100_bases
GCGCGCCGGCCCGCGCCCCGGCGCCTGGCACATCGCCCGGGCGCAAGACGTGGTCGGCGGCAGGGTCTTGAAATCGCCGC
GGCCGGCCCCATTTCGAAGC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 497; Mature: 496

Protein sequence:

>497_residues
MSTVPLDQIPAPHDTATLTLVDQLVQWARRRIDERVFRPGMRMPSIRKLAVDKNVSRFTVVEAYERLVAQGYLDSRRGSG
FYVRERTPAALPGEAARRAGGAPPMPVDNPIDVVWLLRNMLHTVSPEKGPGLGYLPARWLDGELITSALRALGRQTGAQM
LGLGSAQGFLPLRQQLQTRLAEFEVGATPEQIVLVSGVTHAIDLIARLYVRPGDAVIVGDPAWFQMFGRFASQGARLVGM
PYTPDGPDLDALEALVQQWRPKMLVINSVLHNPTGTSLSAAQAFRILRLAEAYDFLVVEDDIYGDLCPARYPATRLASLD
QLKRVILLGSFSKTLAANLRVGYIACSREVADALTDQKMLAGMATPELNERVLYKVLTDGHYRRHVERLRGRLDGVRDKT
ARMLERVGLRLFTTPAAGMFLWADTGADADALAAAAHEAGFLLTPGSLFSPQQSPSTWTRFNVANCGDPALATFLARYLD
AVPRRAAEGERRGFDAA

Sequences:

>Translated_497_residues
MSTVPLDQIPAPHDTATLTLVDQLVQWARRRIDERVFRPGMRMPSIRKLAVDKNVSRFTVVEAYERLVAQGYLDSRRGSG
FYVRERTPAALPGEAARRAGGAPPMPVDNPIDVVWLLRNMLHTVSPEKGPGLGYLPARWLDGELITSALRALGRQTGAQM
LGLGSAQGFLPLRQQLQTRLAEFEVGATPEQIVLVSGVTHAIDLIARLYVRPGDAVIVGDPAWFQMFGRFASQGARLVGM
PYTPDGPDLDALEALVQQWRPKMLVINSVLHNPTGTSLSAAQAFRILRLAEAYDFLVVEDDIYGDLCPARYPATRLASLD
QLKRVILLGSFSKTLAANLRVGYIACSREVADALTDQKMLAGMATPELNERVLYKVLTDGHYRRHVERLRGRLDGVRDKT
ARMLERVGLRLFTTPAAGMFLWADTGADADALAAAAHEAGFLLTPGSLFSPQQSPSTWTRFNVANCGDPALATFLARYLD
AVPRRAAEGERRGFDAA
>Mature_496_residues
STVPLDQIPAPHDTATLTLVDQLVQWARRRIDERVFRPGMRMPSIRKLAVDKNVSRFTVVEAYERLVAQGYLDSRRGSGF
YVRERTPAALPGEAARRAGGAPPMPVDNPIDVVWLLRNMLHTVSPEKGPGLGYLPARWLDGELITSALRALGRQTGAQML
GLGSAQGFLPLRQQLQTRLAEFEVGATPEQIVLVSGVTHAIDLIARLYVRPGDAVIVGDPAWFQMFGRFASQGARLVGMP
YTPDGPDLDALEALVQQWRPKMLVINSVLHNPTGTSLSAAQAFRILRLAEAYDFLVVEDDIYGDLCPARYPATRLASLDQ
LKRVILLGSFSKTLAANLRVGYIACSREVADALTDQKMLAGMATPELNERVLYKVLTDGHYRRHVERLRGRLDGVRDKTA
RMLERVGLRLFTTPAAGMFLWADTGADADALAAAAHEAGFLLTPGSLFSPQQSPSTWTRFNVANCGDPALATFLARYLDA
VPRRAAEGERRGFDAA

Specific function: Unknown

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Homo sapiens, GI7705897, Length=312, Percent_Identity=25.3205128205128, Blast_Score=103, Evalue=5e-22,
Organism=Homo sapiens, GI33469970, Length=312, Percent_Identity=25.3205128205128, Blast_Score=103, Evalue=5e-22,
Organism=Escherichia coli, GI1790797, Length=464, Percent_Identity=26.0775862068966, Blast_Score=141, Evalue=9e-35,
Organism=Escherichia coli, GI1787710, Length=455, Percent_Identity=27.032967032967, Blast_Score=140, Evalue=1e-34,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR000524
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00155 Aminotran_1_2; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 54538; Mature: 54407

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTVPLDQIPAPHDTATLTLVDQLVQWARRRIDERVFRPGMRMPSIRKLAVDKNVSRFTV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHH
VEAYERLVAQGYLDSRRGSGFYVRERTPAALPGEAARRAGGAPPMPVDNPIDVVWLLRNM
HHHHHHHHHHCCHHCCCCCCEEEECCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHH
LHTVSPEKGPGLGYLPARWLDGELITSALRALGRQTGAQMLGLGSAQGFLPLRQQLQTRL
HHHCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
AEFEVGATPEQIVLVSGVTHAIDLIARLYVRPGDAVIVGDPAWFQMFGRFASQGARLVGM
HHHCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCCCEEEEC
PYTPDGPDLDALEALVQQWRPKMLVINSVLHNPTGTSLSAAQAFRILRLAEAYDFLVVED
CCCCCCCCHHHHHHHHHHCCCCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHCEEEEEC
DIYGDLCPARYPATRLASLDQLKRVILLGSFSKTLAANLRVGYIACSREVADALTDQKML
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEEEHHHHHHHHHHHHHHH
AGMATPELNERVLYKVLTDGHYRRHVERLRGRLDGVRDKTARMLERVGLRLFTTPAAGMF
HHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEECCCCCEE
LWADTGADADALAAAAHEAGFLLTPGSLFSPQQSPSTWTRFNVANCGDPALATFLARYLD
EEECCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
AVPRRAAEGERRGFDAA
HHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
STVPLDQIPAPHDTATLTLVDQLVQWARRRIDERVFRPGMRMPSIRKLAVDKNVSRFTV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHH
VEAYERLVAQGYLDSRRGSGFYVRERTPAALPGEAARRAGGAPPMPVDNPIDVVWLLRNM
HHHHHHHHHHCCHHCCCCCCEEEECCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHH
LHTVSPEKGPGLGYLPARWLDGELITSALRALGRQTGAQMLGLGSAQGFLPLRQQLQTRL
HHHCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
AEFEVGATPEQIVLVSGVTHAIDLIARLYVRPGDAVIVGDPAWFQMFGRFASQGARLVGM
HHHCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCCCEEEEC
PYTPDGPDLDALEALVQQWRPKMLVINSVLHNPTGTSLSAAQAFRILRLAEAYDFLVVED
CCCCCCCCHHHHHHHHHHCCCCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHCEEEEEC
DIYGDLCPARYPATRLASLDQLKRVILLGSFSKTLAANLRVGYIACSREVADALTDQKML
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEEEHHHHHHHHHHHHHHH
AGMATPELNERVLYKVLTDGHYRRHVERLRGRLDGVRDKTARMLERVGLRLFTTPAAGMF
HHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEECCCCCEE
LWADTGADADALAAAAHEAGFLLTPGSLFSPQQSPSTWTRFNVANCGDPALATFLARYLD
EEECCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
AVPRRAAEGERRGFDAA
HHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]