| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238028170
Identifier: 238028170
GI number: 238028170
Start: 2986349
End: 2986966
Strand: Reverse
Name: 238028170
Synonym: bglu_1g26220
Alternate gene names: NA
Gene position: 2986966-2986349 (Counterclockwise)
Preceding gene: 238028171
Following gene: 238028169
Centisome position: 76.46
GC content: 69.74
Gene sequence:
>618_bases ATGGTCGAGGCCATTTCGCTCGGCGCGGGGCTCGCTTGGGCGAGCGGGCTGCGCCTGTATCTGACGGTGCTGATCGCCGG CGTGCTCGCGCGCACCGGCCTCGTTCATCTGCCCGATACGCTGGCGGCGCTGACCTCCCCATGGGTGATCGGCGTGGCCG CGGTGCTCGCCATCGCCGAATTCCTCGCCGACAAGATTCCCGCGTTCGATTCGCTCTGGGACGCGATCCACACCTTCATC CGGATTCCGGCGGGCGCGGTGCTCGCCGCCGGCGCACTCGGCCACGCCGATCAAACCATGCTGATGACCGCCGGGCTGGC GGGTGGTACGCTGGCCGGCTCCGCCCACGTCGCGAAGGCCGGCACGCGCGCGCTGATCAACCTGTCGCCGGAGCCGGTGT CGAACTGGATCGCCTCGGCGACCGAGGACGGCCTCGTCTGCGTCGGCCTCGCGCTCGCGTTCTTCGTCCCGCTGCTGTTC CTCGCGATGATGATCGGCTTCGTCGCGTTTGCCGCGTGGGTGCTGCCGAGGCTCTGGCGCGGCGTGTCGGGCGGATTTCG CGGGATGGCGCACCAGATGGTGTCGCGCCTCAATTCACTCGGGGGCAAGCGGGATTGA
Upstream 100 bases:
>100_bases CCGGAACGATGCCGCCGGCAGCCCGTCGAGGCGCCGGCGGTGCGTCCGTCTCGCCGGCCGCCGCGCCGGCACGCGCGTTC GGCGCGCAAGGAGACCGCTC
Downstream 100 bases:
>100_bases CGACGCAGCATGAGGGAGTTCGCGCCGCACGCGGCGCGCGTCTGGGGGCTGGTGAGCTGGCACGGCAAGCGATCCGGATG ACGATGCGCGACTGGCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MVEAISLGAGLAWASGLRLYLTVLIAGVLARTGLVHLPDTLAALTSPWVIGVAAVLAIAEFLADKIPAFDSLWDAIHTFI RIPAGAVLAAGALGHADQTMLMTAGLAGGTLAGSAHVAKAGTRALINLSPEPVSNWIASATEDGLVCVGLALAFFVPLLF LAMMIGFVAFAAWVLPRLWRGVSGGFRGMAHQMVSRLNSLGGKRD
Sequences:
>Translated_205_residues MVEAISLGAGLAWASGLRLYLTVLIAGVLARTGLVHLPDTLAALTSPWVIGVAAVLAIAEFLADKIPAFDSLWDAIHTFI RIPAGAVLAAGALGHADQTMLMTAGLAGGTLAGSAHVAKAGTRALINLSPEPVSNWIASATEDGLVCVGLALAFFVPLLF LAMMIGFVAFAAWVLPRLWRGVSGGFRGMAHQMVSRLNSLGGKRD >Mature_205_residues MVEAISLGAGLAWASGLRLYLTVLIAGVLARTGLVHLPDTLAALTSPWVIGVAAVLAIAEFLADKIPAFDSLWDAIHTFI RIPAGAVLAAGALGHADQTMLMTAGLAGGTLAGSAHVAKAGTRALINLSPEPVSNWIASATEDGLVCVGLALAFFVPLLF LAMMIGFVAFAAWVLPRLWRGVSGGFRGMAHQMVSRLNSLGGKRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21167; Mature: 21167
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEAISLGAGLAWASGLRLYLTVLIAGVLARTGLVHLPDTLAALTSPWVIGVAAVLAIAE CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHHHHH FLADKIPAFDSLWDAIHTFIRIPAGAVLAAGALGHADQTMLMTAGLAGGTLAGSAHVAKA HHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCHHHHHH GTRALINLSPEPVSNWIASATEDGLVCVGLALAFFVPLLFLAMMIGFVAFAAWVLPRLWR CCHHEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVSGGFRGMAHQMVSRLNSLGGKRD HHCCHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MVEAISLGAGLAWASGLRLYLTVLIAGVLARTGLVHLPDTLAALTSPWVIGVAAVLAIAE CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHHHHH FLADKIPAFDSLWDAIHTFIRIPAGAVLAAGALGHADQTMLMTAGLAGGTLAGSAHVAKA HHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCHHHHHH GTRALINLSPEPVSNWIASATEDGLVCVGLALAFFVPLLFLAMMIGFVAFAAWVLPRLWR CCHHEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVSGGFRGMAHQMVSRLNSLGGKRD HHCCHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA