Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is sugE [H]

Identifier: 238028171

GI number: 238028171

Start: 2987161

End: 2987481

Strand: Reverse

Name: sugE [H]

Synonym: bglu_1g26230

Alternate gene names: 238028171

Gene position: 2987481-2987161 (Counterclockwise)

Preceding gene: 238028172

Following gene: 238028170

Centisome position: 76.47

GC content: 68.54

Gene sequence:

>321_bases
ATGTCCTGGATCCTCCTGTTCTTCGCCGGCCTGCTCGAAATCGCCTGGGCGGCGGGCATGAAAGCGTCGGCAGGCTTTAC
GCGCCTCTGGCCGTCCGTATTTACCCTGGTCACGGCGCTCGGCAGCTTCGCGCTGCTCGCGCTGGCGATGCGCCAGTTGC
CGCTCGGCACGGCCTACGCGGTGTGGACCGGCATCGGCATGGTCGGCGCCTTCGTGGTCGGCATCGTGCTGATGGGCGAG
GCCGTCACCTTCCTGCGCGTCGCGAGCGCCCTGCTCGTCGTGCTCGGCCTGGTCGGCCTGAAAGTGAGCTCGGGCCACTG
A

Upstream 100 bases:

>100_bases
TTTTTGTCGTGATTTTGATATAATTCGGGCCGAACCGGGACGACCCGGTCGCGTCTTTCGATTCACGGGGACGGCCCCGT
CGTTCGCCATGGAGCCCCCC

Downstream 100 bases:

>100_bases
GCCCGTGCGGCCAGCGCTCGGCGCCCCGAGCGCTGGCTCGGTGCTTTGCCGTGCGATGCCTGCTGCGGCGCGTCTATAAT
GGAGCGACATTTTCCCGGAA

Product: Small multidrug resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MSWILLFFAGLLEIAWAAGMKASAGFTRLWPSVFTLVTALGSFALLALAMRQLPLGTAYAVWTGIGMVGAFVVGIVLMGE
AVTFLRVASALLVVLGLVGLKVSSGH

Sequences:

>Translated_106_residues
MSWILLFFAGLLEIAWAAGMKASAGFTRLWPSVFTLVTALGSFALLALAMRQLPLGTAYAVWTGIGMVGAFVVGIVLMGE
AVTFLRVASALLVVLGLVGLKVSSGH
>Mature_105_residues
SWILLFFAGLLEIAWAAGMKASAGFTRLWPSVFTLVTALGSFALLALAMRQLPLGTAYAVWTGIGMVGAFVVGIVLMGEA
VTFLRVASALLVVLGLVGLKVSSGH

Specific function: Quaternary ammonium compound efflux pump. Confers resistance to cetylpyridinium, cetyldimethylethyl ammonium and cetrimide cations [H]

COG id: COG2076

COG function: function code P; Membrane transporters of cations and cationic drugs

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small multidrug resistance (SMR) protein family. SugE (TC 2.A.7.1.4) subfamily [H]

Homologues:

Organism=Escherichia coli, GI87082378, Length=104, Percent_Identity=59.6153846153846, Blast_Score=119, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000390 [H]

Pfam domain/function: PF00893 Multi_Drug_Res [H]

EC number: NA

Molecular weight: Translated: 11042; Mature: 10910

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWILLFFAGLLEIAWAAGMKASAGFTRLWPSVFTLVTALGSFALLALAMRQLPLGTAYA
CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VWTGIGMVGAFVVGIVLMGEAVTFLRVASALLVVLGLVGLKVSSGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SWILLFFAGLLEIAWAAGMKASAGFTRLWPSVFTLVTALGSFALLALAMRQLPLGTAYA
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VWTGIGMVGAFVVGIVLMGEAVTFLRVASALLVVLGLVGLKVSSGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]