| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is sugE [H]
Identifier: 238028171
GI number: 238028171
Start: 2987161
End: 2987481
Strand: Reverse
Name: sugE [H]
Synonym: bglu_1g26230
Alternate gene names: 238028171
Gene position: 2987481-2987161 (Counterclockwise)
Preceding gene: 238028172
Following gene: 238028170
Centisome position: 76.47
GC content: 68.54
Gene sequence:
>321_bases ATGTCCTGGATCCTCCTGTTCTTCGCCGGCCTGCTCGAAATCGCCTGGGCGGCGGGCATGAAAGCGTCGGCAGGCTTTAC GCGCCTCTGGCCGTCCGTATTTACCCTGGTCACGGCGCTCGGCAGCTTCGCGCTGCTCGCGCTGGCGATGCGCCAGTTGC CGCTCGGCACGGCCTACGCGGTGTGGACCGGCATCGGCATGGTCGGCGCCTTCGTGGTCGGCATCGTGCTGATGGGCGAG GCCGTCACCTTCCTGCGCGTCGCGAGCGCCCTGCTCGTCGTGCTCGGCCTGGTCGGCCTGAAAGTGAGCTCGGGCCACTG A
Upstream 100 bases:
>100_bases TTTTTGTCGTGATTTTGATATAATTCGGGCCGAACCGGGACGACCCGGTCGCGTCTTTCGATTCACGGGGACGGCCCCGT CGTTCGCCATGGAGCCCCCC
Downstream 100 bases:
>100_bases GCCCGTGCGGCCAGCGCTCGGCGCCCCGAGCGCTGGCTCGGTGCTTTGCCGTGCGATGCCTGCTGCGGCGCGTCTATAAT GGAGCGACATTTTCCCGGAA
Product: Small multidrug resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MSWILLFFAGLLEIAWAAGMKASAGFTRLWPSVFTLVTALGSFALLALAMRQLPLGTAYAVWTGIGMVGAFVVGIVLMGE AVTFLRVASALLVVLGLVGLKVSSGH
Sequences:
>Translated_106_residues MSWILLFFAGLLEIAWAAGMKASAGFTRLWPSVFTLVTALGSFALLALAMRQLPLGTAYAVWTGIGMVGAFVVGIVLMGE AVTFLRVASALLVVLGLVGLKVSSGH >Mature_105_residues SWILLFFAGLLEIAWAAGMKASAGFTRLWPSVFTLVTALGSFALLALAMRQLPLGTAYAVWTGIGMVGAFVVGIVLMGEA VTFLRVASALLVVLGLVGLKVSSGH
Specific function: Quaternary ammonium compound efflux pump. Confers resistance to cetylpyridinium, cetyldimethylethyl ammonium and cetrimide cations [H]
COG id: COG2076
COG function: function code P; Membrane transporters of cations and cationic drugs
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the small multidrug resistance (SMR) protein family. SugE (TC 2.A.7.1.4) subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082378, Length=104, Percent_Identity=59.6153846153846, Blast_Score=119, Evalue=3e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000390 [H]
Pfam domain/function: PF00893 Multi_Drug_Res [H]
EC number: NA
Molecular weight: Translated: 11042; Mature: 10910
Theoretical pI: Translated: 10.87; Mature: 10.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWILLFFAGLLEIAWAAGMKASAGFTRLWPSVFTLVTALGSFALLALAMRQLPLGTAYA CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH VWTGIGMVGAFVVGIVLMGEAVTFLRVASALLVVLGLVGLKVSSGH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SWILLFFAGLLEIAWAAGMKASAGFTRLWPSVFTLVTALGSFALLALAMRQLPLGTAYA HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH VWTGIGMVGAFVVGIVLMGEAVTFLRVASALLVVLGLVGLKVSSGH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]