Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is ybbP [H]

Identifier: 238028169

GI number: 238028169

Start: 2983782

End: 2986352

Strand: Reverse

Name: ybbP [H]

Synonym: bglu_1g26210

Alternate gene names: 238028169

Gene position: 2986352-2983782 (Counterclockwise)

Preceding gene: 238028170

Following gene: 238028168

Centisome position: 76.45

GC content: 73.75

Gene sequence:

>2571_bases
TTGACGACGCAGCATGAGGGAGTTCGCGCCGCACGCGGCGCGCGTCTGGGGGCTGGTGAGCTGGCACGGCAAGCGATCCG
GATGACGATGCGCGACTGGCGCGCGGGCGAGCTGACCCTGCTCGTGCTCGCGCTGGTGCTGGCGGTGGCGGCGCTGACCA
GCGTGGGCTTCCTGTCCGACCGGCTGCGCCAGGGGCTCGAGCGCGACGCGCGCCAGATGCTCGGCGCCGATTTCGTGGTG
CGCGGCGACCGCCCCGTCGACCCCTCGTTCGCCGCCGCCGCGCGCGCCGACGGATTGGCCACGGCGAGCACCGCGATTTT
CCCGAGCATGGTCGGCGGCACCGGCGCCGGCGCGCCGTCGCGGCTCGCCGCCGTGAAGGCCGTCTCGGCCGGCTACCCGC
TGCGCGGGCGGGTGGAGATCGCCGCCTCCGCCGGTGCGCCGGGCCGCCCGGCTGGCGCGATTCCCGCGCCCGGTACGGTG
TGGGCCGATCCCGCGCTGCTCGACGCGCTGCATCTGAAGGTCGGCGACGCGGTGCGGGTCGGCCGGCGCCACTTCACGAT
CGCCGCGGCGATCACGCGCGAGCTCGACCGCGGCTTCTCGTTCGTCAATTTCTCGCCGCGTCTGATGCTGCGCGAGGACG
AGCTCGCCTCCACCGGCCTGGTCGGCTACGGCAGCCGCGTCACCTACCGGCTGCTGGTGGCCGGCCCCGACGCGGCCGTG
GCGCGCTTCGCGGCGTTCGCGCATCAGCGCGTGGACGGCGGCAAGCTGCGCGGCGTCGCGCTCGAATCGCTGCAGGAGGG
CCAGCCGCAGGTGCGCGAGACGCTCGACCGCGCGCGCCATTTCCTGACGCTGGTCTCGCTGCTCACGGCGCTGCTCTCGG
CGGTGGCGATCGCGATGGCCGCACAGCGCTACATGCGCCGCCATCTCGACGGCTGCGCCGCGATGCGCTGCCTCGGTGCC
AGCCAGCGCACGCTGGCCGGGCTCTTCACGCTCGAATTCGTCGCGATCGGCGTCGCCTCCGGGCTGCTCGGCGCGGCGCT
CGGCTACCTGGGCCATCTCGTGCTGCTGGCCGTGCTCGGCAGCCTGATCGATGTGGTGCTGCCGCAGCCCGGCATCGCGC
CCGCGCTGGTCGGGGTGGGCGCCGGGCTGGTGCTGCTGCTCGGCTTCGCGCTGCCGCCGCTGATGCCGCTCACGCGCGTG
CCGCCGGTGCGCGTGCTGCGCCGCGAGTGGGGCGGCGAGGGGCGCGCCGCCTGGCTCGGCTACGGGCTCGGCGTGGTGCT
GTTCGCGGCGCTGCTGATCGCGGCGGCCGGCAACCTGATGCTCGGCCTGATCGTGGCGGGCGGCTTCGCGGGCGGCCTCG
TGCTGTTCGCGACGCTGGCACGCGTGCTGTTGTTCGCGGCCGCGCGCGCGGTGCGCGACGCGCGGGTCGGGGCCGGGCTC
GGCTGGCGCTACGCGATCGCCTCGCTGCATCGGCGCGGCGCGGCCAGCGCGCTGCAGATCACCGCGCTCGCGCTCGGCCT
GATGTGCCTGCTGCTGATCTCGATCACGCGCGACGACCTGGTGGCCGGCTGGCGCAAATCGACGCCGCCCGACGCGCCGA
ACCAGTTCCTGATCGACATCCAGCCCGATCAGCGGCCCGAGGTGGTTCGTTACCTCGCCTCGCAGGGCATCGACGACGCG
CCGCTCGAGCCGATGGTGCGCGGCCGCCTGATCGCGATCGACGGCCGCCCCGTGAACCCCGACAGCTACGCCGAGGCGAA
CACGCGCCGGCTCGTCGACCGCGAATTCAATCTGTCGTACACGACGCAGCTGCCCGACGACAACCGGATCGTGGCAGGGC
GCTGGTTCGGCGTTTCCTCGCAGCCGCAGGTGTCGATCGAGGCGGGGCTCGCGAAGGCGCTCGGCGTGAAGCTCGGCGAC
ACGCTGCGCTTCGACGTGACCGGGCTCACCGTGGAGGCGCCCGTGACCAGCATCCGCAAGCTCGACTGGGGCACCTTCCG
CGTGAATTTCTTCGTGCTGATGCCGCCTGCCGCGCTGGAGGACATGCCGGCGATGTACATCACGAGCTTCCATCTGCCGC
CGCGGCGCTCGCGCGTGATCGACGGGTTGATCGCTCGCCAGCCCGGCATCACGGCCATCGACGTCGCGCCGATTCTCGCG
CAGGTGCAGCGCGTGCTGCTGCAGGTGGTGGGTGCCGTGCAGCTGCTGTTCGGCTTCACGCTCGCGGCGGGCATCCTGGT
GCTCTACACGGCCTTGGCCGGCAGCCGCGACGAGCGTGAGCGCGAGGCGGCGCTGCTGCGCGCGCTCGGCGCGTCACGCG
CGCAGATCGGCGCGGTGCAGCGCGCCGAATTCGTGATCGTTGGCACCATCGCCGGCGTGTGCGCGGCGCTCGGCGCGCTC
GCGATCGGCTCGGTGCTGGCCGTCCAGGTGTTCCGTTTCGAACTCGCGCTCAATCCTTGGCTGGTGCCGGCCGGCATCGC
CGCGGGCATCGTCTGCGCGGGCGCGGCGGGCTGGTGGAGCCTGCGCCGGGTGCTGGCGCGTCCGGCGCTGCGCTCGTTGC
GCGATGCCTGA

Upstream 100 bases:

>100_bases
CGTGGGTGCTGCCGAGGCTCTGGCGCGGCGTGTCGGGCGGATTTCGCGGGATGGCGCACCAGATGGTGTCGCGCCTCAAT
TCACTCGGGGGCAAGCGGGA

Downstream 100 bases:

>100_bases
TGCGGTATCGTTGCGCTTTTCCCGAATTCCGGTTTCCCGTATGACCGACGATGTGACCGACGACAGCGCGCAGGCGAAGC
CGAGCGCGTTCGACCTGGTG

Product: efflux ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 856; Mature: 855

Protein sequence:

>856_residues
MTTQHEGVRAARGARLGAGELARQAIRMTMRDWRAGELTLLVLALVLAVAALTSVGFLSDRLRQGLERDARQMLGADFVV
RGDRPVDPSFAAAARADGLATASTAIFPSMVGGTGAGAPSRLAAVKAVSAGYPLRGRVEIAASAGAPGRPAGAIPAPGTV
WADPALLDALHLKVGDAVRVGRRHFTIAAAITRELDRGFSFVNFSPRLMLREDELASTGLVGYGSRVTYRLLVAGPDAAV
ARFAAFAHQRVDGGKLRGVALESLQEGQPQVRETLDRARHFLTLVSLLTALLSAVAIAMAAQRYMRRHLDGCAAMRCLGA
SQRTLAGLFTLEFVAIGVASGLLGAALGYLGHLVLLAVLGSLIDVVLPQPGIAPALVGVGAGLVLLLGFALPPLMPLTRV
PPVRVLRREWGGEGRAAWLGYGLGVVLFAALLIAAAGNLMLGLIVAGGFAGGLVLFATLARVLLFAAARAVRDARVGAGL
GWRYAIASLHRRGAASALQITALALGLMCLLLISITRDDLVAGWRKSTPPDAPNQFLIDIQPDQRPEVVRYLASQGIDDA
PLEPMVRGRLIAIDGRPVNPDSYAEANTRRLVDREFNLSYTTQLPDDNRIVAGRWFGVSSQPQVSIEAGLAKALGVKLGD
TLRFDVTGLTVEAPVTSIRKLDWGTFRVNFFVLMPPAALEDMPAMYITSFHLPPRRSRVIDGLIARQPGITAIDVAPILA
QVQRVLLQVVGAVQLLFGFTLAAGILVLYTALAGSRDEREREAALLRALGASRAQIGAVQRAEFVIVGTIAGVCAALGAL
AIGSVLAVQVFRFELALNPWLVPAGIAAGIVCAGAAGWWSLRRVLARPALRSLRDA

Sequences:

>Translated_856_residues
MTTQHEGVRAARGARLGAGELARQAIRMTMRDWRAGELTLLVLALVLAVAALTSVGFLSDRLRQGLERDARQMLGADFVV
RGDRPVDPSFAAAARADGLATASTAIFPSMVGGTGAGAPSRLAAVKAVSAGYPLRGRVEIAASAGAPGRPAGAIPAPGTV
WADPALLDALHLKVGDAVRVGRRHFTIAAAITRELDRGFSFVNFSPRLMLREDELASTGLVGYGSRVTYRLLVAGPDAAV
ARFAAFAHQRVDGGKLRGVALESLQEGQPQVRETLDRARHFLTLVSLLTALLSAVAIAMAAQRYMRRHLDGCAAMRCLGA
SQRTLAGLFTLEFVAIGVASGLLGAALGYLGHLVLLAVLGSLIDVVLPQPGIAPALVGVGAGLVLLLGFALPPLMPLTRV
PPVRVLRREWGGEGRAAWLGYGLGVVLFAALLIAAAGNLMLGLIVAGGFAGGLVLFATLARVLLFAAARAVRDARVGAGL
GWRYAIASLHRRGAASALQITALALGLMCLLLISITRDDLVAGWRKSTPPDAPNQFLIDIQPDQRPEVVRYLASQGIDDA
PLEPMVRGRLIAIDGRPVNPDSYAEANTRRLVDREFNLSYTTQLPDDNRIVAGRWFGVSSQPQVSIEAGLAKALGVKLGD
TLRFDVTGLTVEAPVTSIRKLDWGTFRVNFFVLMPPAALEDMPAMYITSFHLPPRRSRVIDGLIARQPGITAIDVAPILA
QVQRVLLQVVGAVQLLFGFTLAAGILVLYTALAGSRDEREREAALLRALGASRAQIGAVQRAEFVIVGTIAGVCAALGAL
AIGSVLAVQVFRFELALNPWLVPAGIAAGIVCAGAAGWWSLRRVLARPALRSLRDA
>Mature_855_residues
TTQHEGVRAARGARLGAGELARQAIRMTMRDWRAGELTLLVLALVLAVAALTSVGFLSDRLRQGLERDARQMLGADFVVR
GDRPVDPSFAAAARADGLATASTAIFPSMVGGTGAGAPSRLAAVKAVSAGYPLRGRVEIAASAGAPGRPAGAIPAPGTVW
ADPALLDALHLKVGDAVRVGRRHFTIAAAITRELDRGFSFVNFSPRLMLREDELASTGLVGYGSRVTYRLLVAGPDAAVA
RFAAFAHQRVDGGKLRGVALESLQEGQPQVRETLDRARHFLTLVSLLTALLSAVAIAMAAQRYMRRHLDGCAAMRCLGAS
QRTLAGLFTLEFVAIGVASGLLGAALGYLGHLVLLAVLGSLIDVVLPQPGIAPALVGVGAGLVLLLGFALPPLMPLTRVP
PVRVLRREWGGEGRAAWLGYGLGVVLFAALLIAAAGNLMLGLIVAGGFAGGLVLFATLARVLLFAAARAVRDARVGAGLG
WRYAIASLHRRGAASALQITALALGLMCLLLISITRDDLVAGWRKSTPPDAPNQFLIDIQPDQRPEVVRYLASQGIDDAP
LEPMVRGRLIAIDGRPVNPDSYAEANTRRLVDREFNLSYTTQLPDDNRIVAGRWFGVSSQPQVSIEAGLAKALGVKLGDT
LRFDVTGLTVEAPVTSIRKLDWGTFRVNFFVLMPPAALEDMPAMYITSFHLPPRRSRVIDGLIARQPGITAIDVAPILAQ
VQRVLLQVVGAVQLLFGFTLAAGILVLYTALAGSRDEREREAALLRALGASRAQIGAVQRAEFVIVGTIAGVCAALGALA
IGSVLAVQVFRFELALNPWLVPAGIAAGIVCAGAAGWWSLRRVLARPALRSLRDA

Specific function: Unknown

COG id: COG3127

COG function: function code Q; Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1786704, Length=814, Percent_Identity=31.8181818181818, Blast_Score=316, Evalue=5e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 90247; Mature: 90116

Theoretical pI: Translated: 11.12; Mature: 11.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTQHEGVRAARGARLGAGELARQAIRMTMRDWRAGELTLLVLALVLAVAALTSVGFLSD
CCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RLRQGLERDARQMLGADFVVRGDRPVDPSFAAAARADGLATASTAIFPSMVGGTGAGAPS
HHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCH
RLAAVKAVSAGYPLRGRVEIAASAGAPGRPAGAIPAPGTVWADPALLDALHLKVGDAVRV
HHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHH
GRRHFTIAAAITRELDRGFSFVNFSPRLMLREDELASTGLVGYGSRVTYRLLVAGPDAAV
CCHHHHHHHHHHHHHHCCCCEEECCCCEEEECHHHHHCCCCCCCCCEEEEEEEECCCHHH
ARFAAFAHQRVDGGKLRGVALESLQEGQPQVRETLDRARHFLTLVSLLTALLSAVAIAMA
HHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQRYMRRHLDGCAAMRCLGASQRTLAGLFTLEFVAIGVASGLLGAALGYLGHLVLLAVLG
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLIDVVLPQPGIAPALVGVGAGLVLLLGFALPPLMPLTRVPPVRVLRREWGGEGRAAWLG
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEHHH
YGLGVVLFAALLIAAAGNLMLGLIVAGGFAGGLVLFATLARVLLFAAARAVRDARVGAGL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GWRYAIASLHRRGAASALQITALALGLMCLLLISITRDDLVAGWRKSTPPDAPNQFLIDI
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
QPDQRPEVVRYLASQGIDDAPLEPMVRGRLIAIDGRPVNPDSYAEANTRRLVDREFNLSY
CCCCCHHHHHHHHHCCCCCCCCCHHHCCEEEEECCCCCCCCCCCCCHHHHHHCCCCCCEE
TTQLPDDNRIVAGRWFGVSSQPQVSIEAGLAKALGVKLGDTLRFDVTGLTVEAPVTSIRK
EEECCCCCEEEEEEEECCCCCCCEEHHHHHHHHHCCCCCCEEEEEEECEEEECCHHHHHH
LDWGTFRVNFFVLMPPAALEDMPAMYITSFHLPPRRSRVIDGLIARQPGITAIDVAPILA
CCCCEEEEEEEEEECCHHHHHCCHHHHEEECCCCHHHHHHHHHHHCCCCCCEEHHHHHHH
QVQRVLLQVVGAVQLLFGFTLAAGILVLYTALAGSRDEREREAALLRALGASRAQIGAVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHH
RAEFVIVGTIAGVCAALGALAIGSVLAVQVFRFELALNPWLVPAGIAAGIVCAGAAGWWS
HCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHH
LRRVLARPALRSLRDA
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTQHEGVRAARGARLGAGELARQAIRMTMRDWRAGELTLLVLALVLAVAALTSVGFLSD
CCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RLRQGLERDARQMLGADFVVRGDRPVDPSFAAAARADGLATASTAIFPSMVGGTGAGAPS
HHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCH
RLAAVKAVSAGYPLRGRVEIAASAGAPGRPAGAIPAPGTVWADPALLDALHLKVGDAVRV
HHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHH
GRRHFTIAAAITRELDRGFSFVNFSPRLMLREDELASTGLVGYGSRVTYRLLVAGPDAAV
CCHHHHHHHHHHHHHHCCCCEEECCCCEEEECHHHHHCCCCCCCCCEEEEEEEECCCHHH
ARFAAFAHQRVDGGKLRGVALESLQEGQPQVRETLDRARHFLTLVSLLTALLSAVAIAMA
HHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQRYMRRHLDGCAAMRCLGASQRTLAGLFTLEFVAIGVASGLLGAALGYLGHLVLLAVLG
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLIDVVLPQPGIAPALVGVGAGLVLLLGFALPPLMPLTRVPPVRVLRREWGGEGRAAWLG
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEHHH
YGLGVVLFAALLIAAAGNLMLGLIVAGGFAGGLVLFATLARVLLFAAARAVRDARVGAGL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GWRYAIASLHRRGAASALQITALALGLMCLLLISITRDDLVAGWRKSTPPDAPNQFLIDI
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
QPDQRPEVVRYLASQGIDDAPLEPMVRGRLIAIDGRPVNPDSYAEANTRRLVDREFNLSY
CCCCCHHHHHHHHHCCCCCCCCCHHHCCEEEEECCCCCCCCCCCCCHHHHHHCCCCCCEE
TTQLPDDNRIVAGRWFGVSSQPQVSIEAGLAKALGVKLGDTLRFDVTGLTVEAPVTSIRK
EEECCCCCEEEEEEEECCCCCCCEEHHHHHHHHHCCCCCCEEEEEEECEEEECCHHHHHH
LDWGTFRVNFFVLMPPAALEDMPAMYITSFHLPPRRSRVIDGLIARQPGITAIDVAPILA
CCCCEEEEEEEEEECCHHHHHCCHHHHEEECCCCHHHHHHHHHHHCCCCCCEEHHHHHHH
QVQRVLLQVVGAVQLLFGFTLAAGILVLYTALAGSRDEREREAALLRALGASRAQIGAVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHH
RAEFVIVGTIAGVCAALGALAIGSVLAVQVFRFELALNPWLVPAGIAAGIVCAGAAGWWS
HCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHH
LRRVLARPALRSLRDA
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]