| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is can [H]
Identifier: 238028150
GI number: 238028150
Start: 2964115
End: 2964786
Strand: Direct
Name: can [H]
Synonym: bglu_1g26010
Alternate gene names: 238028150
Gene position: 2964115-2964786 (Clockwise)
Preceding gene: 238028149
Following gene: 238028151
Centisome position: 75.88
GC content: 72.02
Gene sequence:
>672_bases ATGAATCGCGCCAAAAGCCTGTTAGCCGCCAACGCCGCCTGGGCCAGCGAAACCGCCGAACGCGCGCCCGGCTTCTTCGA CGGTCTCGCGCAGGGCCAGAACCCGCGCGTGCTCTGGATCGGCTGCGCCGACAGCCGCGTACCCGCCGAAGCGATCACCC ATAGCGCGCCGGGCGAGCTGTTCGTGCACCGCAACATCGCGAACCTGTTCCAGCCCGGCGACGACAATGGCGCGAGCGTG CTCGAATACGCAGTGCGCGTCCTGAAGGTCGATCACGTCATCGTCTGCGGCCATTACGGCTGCGGCGGCGTGCGCGCATC TCTGCTGCCGCCGCCGGCCGACCTGCCGCACGTGGCGCGCCGCATCGCGCCGCTCTGCGCGCTCGCGGCCCGCCACCGCG GCACGCTCGACGGCCTGCCCGCCGACCAGGCCGCCGATCGCCTCGCCGAGCTGAACGTGCAGGAACAGGTGCGCCTGCTG CGCGAAAGCCCGATCGTGAGGGCCGGCGATCCGCCGCCGCTCGTCCACGGCTGGATCTTCTCGCTGTCGGACGGCCTGCT GAAGGTGCTGACGTCGGGCTACCCGGACGCCGACGGCCGGCTCGCCGATGTCCCCGACGCCAGCGGCATGCCACGCGACG CCTCGCGCGCCGACGTGCTGAAGGCTGCCTGA
Upstream 100 bases:
>100_bases CCCCTAAGATCGCATCAAACAAGCTTTCAATTTAGAAAGAATCAGCATATCGATTCGCCACGCGCTGCCGTTTTCTCATT CAATCATCAAGGATTCCTCA
Downstream 100 bases:
>100_bases GCCGCACCCGCTCCCCATTTCGCCCAGCCCTGTCCCGAGATCATGAATCCACGCACCTTCCTTTCCACGTTTCCGCGCGA CGCCGTTGCCGGCACCGTGG
Product: carbonate dehydratase
Products: NA
Alternate protein names: Carbonate dehydratase 2 [H]
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MNRAKSLLAANAAWASETAERAPGFFDGLAQGQNPRVLWIGCADSRVPAEAITHSAPGELFVHRNIANLFQPGDDNGASV LEYAVRVLKVDHVIVCGHYGCGGVRASLLPPPADLPHVARRIAPLCALAARHRGTLDGLPADQAADRLAELNVQEQVRLL RESPIVRAGDPPPLVHGWIFSLSDGLLKVLTSGYPDADGRLADVPDASGMPRDASRADVLKAA
Sequences:
>Translated_223_residues MNRAKSLLAANAAWASETAERAPGFFDGLAQGQNPRVLWIGCADSRVPAEAITHSAPGELFVHRNIANLFQPGDDNGASV LEYAVRVLKVDHVIVCGHYGCGGVRASLLPPPADLPHVARRIAPLCALAARHRGTLDGLPADQAADRLAELNVQEQVRLL RESPIVRAGDPPPLVHGWIFSLSDGLLKVLTSGYPDADGRLADVPDASGMPRDASRADVLKAA >Mature_223_residues MNRAKSLLAANAAWASETAERAPGFFDGLAQGQNPRVLWIGCADSRVPAEAITHSAPGELFVHRNIANLFQPGDDNGASV LEYAVRVLKVDHVIVCGHYGCGGVRASLLPPPADLPHVARRIAPLCALAARHRGTLDGLPADQAADRLAELNVQEQVRLL RESPIVRAGDPPPLVHGWIFSLSDGLLKVLTSGYPDADGRLADVPDASGMPRDASRADVLKAA
Specific function: Unknown
COG id: COG0288
COG function: function code P; Carbonic anhydrase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the beta-class carbonic anhydrase family [H]
Homologues:
Organism=Escherichia coli, GI1786318, Length=193, Percent_Identity=45.5958549222798, Blast_Score=174, Evalue=3e-45, Organism=Escherichia coli, GI1786534, Length=189, Percent_Identity=31.2169312169312, Blast_Score=80, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6324292, Length=197, Percent_Identity=31.4720812182741, Blast_Score=112, Evalue=6e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001765 - InterPro: IPR015892 [H]
Pfam domain/function: PF00484 Pro_CA [H]
EC number: =4.2.1.1 [H]
Molecular weight: Translated: 23606; Mature: 23606
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: PS00704 PROK_CO2_ANHYDRASE_1 ; PS00705 PROK_CO2_ANHYDRASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRAKSLLAANAAWASETAERAPGFFDGLAQGQNPRVLWIGCADSRVPAEAITHSAPGEL CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCCCE FVHRNIANLFQPGDDNGASVLEYAVRVLKVDHVIVCGHYGCGGVRASLLPPPADLPHVAR EEECCHHHHCCCCCCCHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCHHHHHH RIAPLCALAARHRGTLDGLPADQAADRLAELNVQEQVRLLRESPIVRAGDPPPLVHGWIF HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCEECCCCCCHHHHHHH SLSDGLLKVLTSGYPDADGRLADVPDASGMPRDASRADVLKAA HHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCHHHHHHCC >Mature Secondary Structure MNRAKSLLAANAAWASETAERAPGFFDGLAQGQNPRVLWIGCADSRVPAEAITHSAPGEL CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCCCE FVHRNIANLFQPGDDNGASVLEYAVRVLKVDHVIVCGHYGCGGVRASLLPPPADLPHVAR EEECCHHHHCCCCCCCHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCHHHHHH RIAPLCALAARHRGTLDGLPADQAADRLAELNVQEQVRLLRESPIVRAGDPPPLVHGWIF HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCEECCCCCCHHHHHHH SLSDGLLKVLTSGYPDADGRLADVPDASGMPRDASRADVLKAA HHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8202364; 9278503; 10493123 [H]