| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028149
Identifier: 238028149
GI number: 238028149
Start: 2963168
End: 2963668
Strand: Direct
Name: 238028149
Synonym: bglu_1g26000
Alternate gene names: NA
Gene position: 2963168-2963668 (Clockwise)
Preceding gene: 238028122
Following gene: 238028150
Centisome position: 75.85
GC content: 63.87
Gene sequence:
>501_bases ATGTTTCGACGATTTCCGGTACTGCTTGCCGCAGCGGCCACCCTGCTCGCCGGCTGCGCGCAACCGTGGCAGCGCTACCA GGTGGGAGAGGACCAGTCGGCGCTCGTGGCGCGACTCGGCCCGCCCCGCGAGGTCTACGACCTGCCCGGCGGCGGCAAGC GGCTGATGTGGCCGACTCAGCCGATGGGCGAAACCACCACCACGGCCGACATCGACGCGGCCGGCAAGGTAATCGGCATG CGCCAGGCGCTGCAGCCCAGCGAGTTCTATCGCGCCGAGATCGGCAAGTGGAAAAAGGCCGACGTGCTCGTCAACTTCGG ACGCCCCGAGGAAACCTCCTATTTTCCGCTGATGAAACGCGAAGTGTGGACCTATCGGTATCTCGAGGACAACGTCTGGT ACATGCTCTATAGCTTCTACTTCGACGACCAAGGCATCCTGCGGCTCACGCAGAAGACGCCCGATCCGCTGCACGACCCC GACCGTCGCTTGATATTCTGA
Upstream 100 bases:
>100_bases GCGGAACAGCACGAAGCGGCGCAGCATGTAGCCCGCGGCGGGTGAGCACCCGCGTGTGCGTCGTGATACAACAGCGGCAT CGCATTCGACGGAGACCAGC
Downstream 100 bases:
>100_bases GCGCAATTCGGCGGCGTCATATCAATATACCGATCACCTTTCATGTAATCGCCCAGCTGTCGGTTTTTACAGGTTTTACC ATTCGGCCATTCCCGCCCAT
Product: putative lipoprotein
Products: NA
Alternate protein names: Lipoprotein Transmembrane; Transmembrane Protein; Transmembrane Lipoprotein; Exported Protein
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MFRRFPVLLAAAATLLAGCAQPWQRYQVGEDQSALVARLGPPREVYDLPGGGKRLMWPTQPMGETTTTADIDAAGKVIGM RQALQPSEFYRAEIGKWKKADVLVNFGRPEETSYFPLMKREVWTYRYLEDNVWYMLYSFYFDDQGILRLTQKTPDPLHDP DRRLIF
Sequences:
>Translated_166_residues MFRRFPVLLAAAATLLAGCAQPWQRYQVGEDQSALVARLGPPREVYDLPGGGKRLMWPTQPMGETTTTADIDAAGKVIGM RQALQPSEFYRAEIGKWKKADVLVNFGRPEETSYFPLMKREVWTYRYLEDNVWYMLYSFYFDDQGILRLTQKTPDPLHDP DRRLIF >Mature_166_residues MFRRFPVLLAAAATLLAGCAQPWQRYQVGEDQSALVARLGPPREVYDLPGGGKRLMWPTQPMGETTTTADIDAAGKVIGM RQALQPSEFYRAEIGKWKKADVLVNFGRPEETSYFPLMKREVWTYRYLEDNVWYMLYSFYFDDQGILRLTQKTPDPLHDP DRRLIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19199; Mature: 19199
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRRFPVLLAAAATLLAGCAQPWQRYQVGEDQSALVARLGPPREVYDLPGGGKRLMWPTQ CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEECCCCCCEEECCCC PMGETTTTADIDAAGKVIGMRQALQPSEFYRAEIGKWKKADVLVNFGRPEETSYFPLMKR CCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHH EVWTYRYLEDNVWYMLYSFYFDDQGILRLTQKTPDPLHDPDRRLIF HHHEEEEECCCEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MFRRFPVLLAAAATLLAGCAQPWQRYQVGEDQSALVARLGPPREVYDLPGGGKRLMWPTQ CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEECCCCCCEEECCCC PMGETTTTADIDAAGKVIGMRQALQPSEFYRAEIGKWKKADVLVNFGRPEETSYFPLMKR CCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHH EVWTYRYLEDNVWYMLYSFYFDDQGILRLTQKTPDPLHDPDRRLIF HHHEEEEECCCEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA