| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is yajO [H]
Identifier: 238028105
GI number: 238028105
Start: 2915599
End: 2916570
Strand: Direct
Name: yajO [H]
Synonym: bglu_1g25560
Alternate gene names: 238028105
Gene position: 2915599-2916570 (Clockwise)
Preceding gene: 238028104
Following gene: 238028106
Centisome position: 74.63
GC content: 63.37
Gene sequence:
>972_bases ATGAATTACAGGCGTTTGGGCCGCTCGGGGCTGCAGGTCAGCGAATTGTCGATCGGCTCGTGGGTGACATACGGCAATCA GGTCGACCAGCGCGCCGCACGCGAGTCGCTGGCCGCGGCGCGCGACGCCGGCATCAATTTCTTCGACAATGCCGAGGTGT ACGCGCACGGCCAATCCGAGGAGATCATGGGCGAGGCGCTGAAGGCACTCGGCTGGTCGCGCGTCAGCTACGTCGTCTCG ACGAAATTCTTCTGGGGCTTGAACGAAGCCCCGAACCAGTACCACACGCTGAACCGCAAGTACTTGATGGATGCGATCGA CGGATCGCTGCGCCGCTTGAAACTCGACTACGTCGATCTGGTGTTCTGCCATCGCCCCGATCCGAATACGCCGATCGAGG AAACGGTCTGGGCGATGAGCGACATGATCACGCGCGGCAAGGCGCAGTACTGGGGCACGTCGGAGTGGAGTGCCGACGAA ATCCGGGCCGCCTACGGCATTGCCGAGCGGCACCATCTGCATAAGCCGGTCATGGAACAGCCGCAGTACAACCTGTTCCA TCGGCGTCGCGTCGAGCGGGAATACCGGCGGCTCTACGAGGACATCGGTCTCGGCCTGACGACCTGGAGTCCGCTCGCAT CGGGCCTGCTGACCGGCAAGTACCGCAATGGCGTGCCAGAAGGCAGCCGTGCCGCGGTGCAGGGGTACGACTGGCTACGC GACCAGCTCACGGATCGCGCGAAAAACGACACGGTTGCCAAGCTCGCCGGCGTCGCGGACGAACTCGGCTGCACTGTCGC CCAGCTCGCGATCGCCTGGGTGCTGAAGAATCCGAACGTCAGCACCGTGATCACCGGCGCGTCGCACGTCAAGCAGATCG GCGAGAACATGAAGGCGGTCGAGGTGGCGGCGCGGATTTCGCCTGAACTGAAACAACGCATCGAAGAGATCGTCGGCGAT CAGGCGCAGTAG
Upstream 100 bases:
>100_bases GGTGCCACCGCGCGAGCGGTGCTGCTGTTGTGCAAGAGGCGGACTGCATGGAGCCGCCAAACGGGCTAAGCTAACTGCTG TCCCAATTCCAGGAGGTCAC
Downstream 100 bases:
>100_bases GCGCCGTCACGTACAATAGCCGGCCGCGCGACAGCCATGCATTGGTGCAGCCCTTGCGGCGCCGGCATGGAGTCCGCGGC CGATTTCGATTTCATTCGCC
Product: putative voltage-gated potassium channel subunit beta
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MNYRRLGRSGLQVSELSIGSWVTYGNQVDQRAARESLAAARDAGINFFDNAEVYAHGQSEEIMGEALKALGWSRVSYVVS TKFFWGLNEAPNQYHTLNRKYLMDAIDGSLRRLKLDYVDLVFCHRPDPNTPIEETVWAMSDMITRGKAQYWGTSEWSADE IRAAYGIAERHHLHKPVMEQPQYNLFHRRRVEREYRRLYEDIGLGLTTWSPLASGLLTGKYRNGVPEGSRAAVQGYDWLR DQLTDRAKNDTVAKLAGVADELGCTVAQLAIAWVLKNPNVSTVITGASHVKQIGENMKAVEVAARISPELKQRIEEIVGD QAQ
Sequences:
>Translated_323_residues MNYRRLGRSGLQVSELSIGSWVTYGNQVDQRAARESLAAARDAGINFFDNAEVYAHGQSEEIMGEALKALGWSRVSYVVS TKFFWGLNEAPNQYHTLNRKYLMDAIDGSLRRLKLDYVDLVFCHRPDPNTPIEETVWAMSDMITRGKAQYWGTSEWSADE IRAAYGIAERHHLHKPVMEQPQYNLFHRRRVEREYRRLYEDIGLGLTTWSPLASGLLTGKYRNGVPEGSRAAVQGYDWLR DQLTDRAKNDTVAKLAGVADELGCTVAQLAIAWVLKNPNVSTVITGASHVKQIGENMKAVEVAARISPELKQRIEEIVGD QAQ >Mature_323_residues MNYRRLGRSGLQVSELSIGSWVTYGNQVDQRAARESLAAARDAGINFFDNAEVYAHGQSEEIMGEALKALGWSRVSYVVS TKFFWGLNEAPNQYHTLNRKYLMDAIDGSLRRLKLDYVDLVFCHRPDPNTPIEETVWAMSDMITRGKAQYWGTSEWSADE IRAAYGIAERHHLHKPVMEQPQYNLFHRRRVEREYRRLYEDIGLGLTTWSPLASGLLTGKYRNGVPEGSRAAVQGYDWLR DQLTDRAKNDTVAKLAGVADELGCTVAQLAIAWVLKNPNVSTVITGASHVKQIGENMKAVEVAARISPELKQRIEEIVGD QAQ
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=324, Percent_Identity=45.9876543209877, Blast_Score=318, Evalue=5e-87, Organism=Homo sapiens, GI4504825, Length=322, Percent_Identity=45.9627329192547, Blast_Score=317, Evalue=1e-86, Organism=Homo sapiens, GI27436964, Length=324, Percent_Identity=45.0617283950617, Blast_Score=312, Evalue=2e-85, Organism=Homo sapiens, GI27436962, Length=324, Percent_Identity=45.0617283950617, Blast_Score=311, Evalue=5e-85, Organism=Homo sapiens, GI27436966, Length=324, Percent_Identity=44.7530864197531, Blast_Score=309, Evalue=2e-84, Organism=Homo sapiens, GI27436971, Length=324, Percent_Identity=45.679012345679, Blast_Score=306, Evalue=2e-83, Organism=Homo sapiens, GI223718702, Length=291, Percent_Identity=26.1168384879725, Blast_Score=82, Evalue=9e-16, Organism=Homo sapiens, GI41152114, Length=291, Percent_Identity=28.5223367697594, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI41327764, Length=291, Percent_Identity=27.4914089347079, Blast_Score=78, Evalue=1e-14, Organism=Escherichia coli, GI87081735, Length=320, Percent_Identity=36.875, Blast_Score=176, Evalue=2e-45, Organism=Escherichia coli, GI1789375, Length=326, Percent_Identity=34.3558282208589, Blast_Score=171, Evalue=5e-44, Organism=Escherichia coli, GI1788070, Length=313, Percent_Identity=28.4345047923323, Blast_Score=122, Evalue=4e-29, Organism=Escherichia coli, GI1789199, Length=350, Percent_Identity=28.5714285714286, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI1788081, Length=288, Percent_Identity=25.3472222222222, Blast_Score=73, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6325169, Length=342, Percent_Identity=27.1929824561404, Blast_Score=116, Evalue=5e-27, Organism=Saccharomyces cerevisiae, GI6323998, Length=330, Percent_Identity=25.7575757575758, Blast_Score=82, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6319958, Length=304, Percent_Identity=26.9736842105263, Blast_Score=79, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6319951, Length=342, Percent_Identity=27.1929824561404, Blast_Score=74, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6322615, Length=226, Percent_Identity=24.7787610619469, Blast_Score=64, Evalue=4e-11, Organism=Drosophila melanogaster, GI24640980, Length=343, Percent_Identity=32.3615160349854, Blast_Score=202, Evalue=2e-52, Organism=Drosophila melanogaster, GI45549126, Length=343, Percent_Identity=32.3615160349854, Blast_Score=202, Evalue=2e-52, Organism=Drosophila melanogaster, GI24646155, Length=309, Percent_Identity=28.1553398058252, Blast_Score=91, Evalue=8e-19, Organism=Drosophila melanogaster, GI24646159, Length=227, Percent_Identity=26.431718061674, Blast_Score=82, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 36415; Mature: 36415
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYRRLGRSGLQVSELSIGSWVTYGNQVDQRAARESLAAARDAGINFFDNAEVYAHGQSE CCHHHHCCCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHH EIMGEALKALGWSRVSYVVSTKFFWGLNEAPNQYHTLNRKYLMDAIDGSLRRLKLDYVDL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHEEHHHEEE VFCHRPDPNTPIEETVWAMSDMITRGKAQYWGTSEWSADEIRAAYGIAERHHLHKPVMEQ EEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCC PQYNLFHRRRVEREYRRLYEDIGLGLTTWSPLASGLLTGKYRNGVPEGSRAAVQGYDWLR CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHH DQLTDRAKNDTVAKLAGVADELGCTVAQLAIAWVLKNPNVSTVITGASHVKQIGENMKAV HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHCCHHHH EVAARISPELKQRIEEIVGDQAQ HHHHHCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MNYRRLGRSGLQVSELSIGSWVTYGNQVDQRAARESLAAARDAGINFFDNAEVYAHGQSE CCHHHHCCCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHH EIMGEALKALGWSRVSYVVSTKFFWGLNEAPNQYHTLNRKYLMDAIDGSLRRLKLDYVDL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHEEHHHEEE VFCHRPDPNTPIEETVWAMSDMITRGKAQYWGTSEWSADEIRAAYGIAERHHLHKPVMEQ EEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCC PQYNLFHRRRVEREYRRLYEDIGLGLTTWSPLASGLLTGKYRNGVPEGSRAAVQGYDWLR CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHH DQLTDRAKNDTVAKLAGVADELGCTVAQLAIAWVLKNPNVSTVITGASHVKQIGENMKAV HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHCCHHHH EVAARISPELKQRIEEIVGDQAQ HHHHHCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]