Click here to switch to the map view.

The map label for this gene is yhiR [H]

Identifier: 238028106

GI number: 238028106

Start: 2916683

End: 2917528

Strand: Direct

Name: yhiR [H]

Synonym: bglu_1g25570

Alternate gene names: 238028106

Gene position: 2916683-2917528 (Clockwise)

Preceding gene: 238028105

Following gene: 238028110

Centisome position: 74.66

GC content: 61.11

Gene sequence:

>846_bases
ATGTTCAGTTATCGCCACGCGTTCCATGCCGGCAATCATGCGGATGTGCTCAAGCACGCCGTTGTCGTCCAGTTGCTCAA
CTATTTCAACAAGAAAGACAAGTCGTACTGGTACGTCGATACGCATGCGGGCGCGGGAATCTACGCATTGGACGAAGGTT
TCGCCACCAAGACCGCTGAATATGAAACCGGTATCGCGAAGCTGTGGAACGCGGACAAGCTGCCGGCAGCGCTGGAAACC
TATGTCGCCGAGATCCGCTCCTGCAACGACGCCGGCCAGTTGCGCTATTACCCGGGTTCGCCCTATCTGGCGTGGCGCAT
GCTGCGCGAGCAGGACCGGATGCGCCTGTTCGAGATGCACAGCACGGAGATCGGCGTGCTACGGCACAACTTCCGCGACG
CGGGACGCCGCGCCATGATCTATGCAACAGATGGCTTTGAAGGGCTCAAGGCGCTGCTGCCTCCGCCGCCACGCCGGGCC
ATGGTACTGATCGACCCCTCTTACGAGGACAAGCGCGACTACGCACGAACGCTAGGCTGTGTCGAAGAGGGGCTGAAGCG
CTTCGCGACCGGCTGTTACGCAGTCTGGTATCCACAGGTCAAGCGTCCGGAATCCGAACGCTTCCCCGATCACCTGAAAC
GCCTGCAGCCAAGCAACTGGCTGCATCTGACGCTGACTGTGAGCCGCCCGCCCTCGGACGGCTTCGGACTCTATGGCAGC
GGAATGTTCATTCTGAACCCGCCTTATACCTTGGCCGAGTCGATGCGCGAGGCCCTGCCCTATCTCGCCGAGGCCTTGGG
GCAGGACGACGGAGCCAGGTTCGGGATCGAATCGCGCAGTGCCTGA

Upstream 100 bases:

>100_bases
ACAATAGCCGGCCGCGCGACAGCCATGCATTGGTGCAGCCCTTGCGGCGCCGGCATGGAGTCCGCGGCCGATTTCGATTT
CATTCGCCTCGTCCACCGCC

Downstream 100 bases:

>100_bases
GCGGGCATCAGCGCGCCGGGTTGTCAGGTCGACGCCATCATTCCTATTGCCGATAGGACGGCGTCGGCACCCTGATATAG
GGCGCCACCACCATCGGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MFSYRHAFHAGNHADVLKHAVVVQLLNYFNKKDKSYWYVDTHAGAGIYALDEGFATKTAEYETGIAKLWNADKLPAALET
YVAEIRSCNDAGQLRYYPGSPYLAWRMLREQDRMRLFEMHSTEIGVLRHNFRDAGRRAMIYATDGFEGLKALLPPPPRRA
MVLIDPSYEDKRDYARTLGCVEEGLKRFATGCYAVWYPQVKRPESERFPDHLKRLQPSNWLHLTLTVSRPPSDGFGLYGS
GMFILNPPYTLAESMREALPYLAEALGQDDGARFGIESRSA

Sequences:

>Translated_281_residues
MFSYRHAFHAGNHADVLKHAVVVQLLNYFNKKDKSYWYVDTHAGAGIYALDEGFATKTAEYETGIAKLWNADKLPAALET
YVAEIRSCNDAGQLRYYPGSPYLAWRMLREQDRMRLFEMHSTEIGVLRHNFRDAGRRAMIYATDGFEGLKALLPPPPRRA
MVLIDPSYEDKRDYARTLGCVEEGLKRFATGCYAVWYPQVKRPESERFPDHLKRLQPSNWLHLTLTVSRPPSDGFGLYGS
GMFILNPPYTLAESMREALPYLAEALGQDDGARFGIESRSA
>Mature_281_residues
MFSYRHAFHAGNHADVLKHAVVVQLLNYFNKKDKSYWYVDTHAGAGIYALDEGFATKTAEYETGIAKLWNADKLPAALET
YVAEIRSCNDAGQLRYYPGSPYLAWRMLREQDRMRLFEMHSTEIGVLRHNFRDAGRRAMIYATDGFEGLKALLPPPPRRA
MVLIDPSYEDKRDYARTLGCVEEGLKRFATGCYAVWYPQVKRPESERFPDHLKRLQPSNWLHLTLTVSRPPSDGFGLYGS
GMFILNPPYTLAESMREALPYLAEALGQDDGARFGIESRSA

Specific function: Unknown

COG id: COG2961

COG function: function code R; Protein involved in catabolism of external DNA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0441 [H]

Homologues:

Organism=Escherichia coli, GI1789914, Length=266, Percent_Identity=47.7443609022556, Blast_Score=251, Evalue=5e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR007473 [H]

Pfam domain/function: PF04378 DUF519 [H]

EC number: NA

Molecular weight: Translated: 32014; Mature: 32014

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSYRHAFHAGNHADVLKHAVVVQLLNYFNKKDKSYWYVDTHAGAGIYALDEGFATKTAE
CCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEECCCCCCCCHH
YETGIAKLWNADKLPAALETYVAEIRSCNDAGQLRYYPGSPYLAWRMLREQDRMRLFEMH
HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHC
STEIGVLRHNFRDAGRRAMIYATDGFEGLKALLPPPPRRAMVLIDPSYEDKRDYARTLGC
CCHHHHHHHHHHHCCCEEEEEEECCHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHH
VEEGLKRFATGCYAVWYPQVKRPESERFPDHLKRLQPSNWLHLTLTVSRPPSDGFGLYGS
HHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHCCCCCEEEEEEEEECCCCCCCCEEEC
GMFILNPPYTLAESMREALPYLAEALGQDDGARFGIESRSA
CEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCC
>Mature Secondary Structure
MFSYRHAFHAGNHADVLKHAVVVQLLNYFNKKDKSYWYVDTHAGAGIYALDEGFATKTAE
CCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEECCCCCCCCHH
YETGIAKLWNADKLPAALETYVAEIRSCNDAGQLRYYPGSPYLAWRMLREQDRMRLFEMH
HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHC
STEIGVLRHNFRDAGRRAMIYATDGFEGLKALLPPPPRRAMVLIDPSYEDKRDYARTLGC
CCHHHHHHHHHHHCCCEEEEEEECCHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHH
VEEGLKRFATGCYAVWYPQVKRPESERFPDHLKRLQPSNWLHLTLTVSRPPSDGFGLYGS
HHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHCCCCCEEEEEEEEECCCCCCCCEEEC
GMFILNPPYTLAESMREALPYLAEALGQDDGARFGIESRSA
CEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]