| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027634
Identifier: 238027634
GI number: 238027634
Start: 2246783
End: 2247322
Strand: Reverse
Name: 238027634
Synonym: bglu_1g20550
Alternate gene names: NA
Gene position: 2247322-2246783 (Counterclockwise)
Preceding gene: 238027635
Following gene: 238027633
Centisome position: 57.53
GC content: 67.22
Gene sequence:
>540_bases ATGACGACTGACATCACCACCGAGTTCGACGTCGCGGAGGCGCCGCCGGCGCTGGGCGGTCTGAACCTGCTGGCGCTCGA CCTCGGCACGCAGTGCGGCTGGGCGCTTTCGAAAGGCGGCGTCCTGACCTACGGGACGAAGAACTTCTCCGCGAAGCGGA CCGACGGGCCCGGGCAACGGTGGCTGAAGTTCCGCGCCATGCTCGGCAATCACTTTGCCGCGGCCGGCGAGATCCACGCG ATCTACTACGAGCACGTCATGGCCCACGGCACGAAGGATCATCCGAACACGATCGCCGCACACGTGTACGGCGGGTTCCT CGCGCACCTGGAGGCGTGGTGCGATGTCCAGCGCGTTCGCCTGGTCGCGGTGTCGGTCGGGACCGTGAAGAAGGCCTGGA CCGGCAACGGCAAGGCGAGCAAGGAGGCCATGATCGACGAGGCTCGTCGGCGCGGTTTCCGGGTGGGGGCCGAGGAAGAC GACACGGCCGACGCGCTGGCCATCATGCACCTCGGCATGTCGATGGAGGGCATCCAATGA
Upstream 100 bases:
>100_bases GCCTATCTCGCATTCATCCATGAGCAGGCGAAGTTCGGCGACCTCGCCATGGGCTACTACCCGCAACCGCGCTCGGCGCC TGTTAAATCGCGAGGCTTCA
Downstream 100 bases:
>100_bases GCTGCCATGACGCGTCGTGGAACCGCATCCGAGTGGTGCTTCTGGGCAGCGACGGCATGTCCGTGCGCGATATCAGCGTG GCGAGCGGCATTCCGCTGAC
Product: putative polynucleotidyl transferase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MTTDITTEFDVAEAPPALGGLNLLALDLGTQCGWALSKGGVLTYGTKNFSAKRTDGPGQRWLKFRAMLGNHFAAAGEIHA IYYEHVMAHGTKDHPNTIAAHVYGGFLAHLEAWCDVQRVRLVAVSVGTVKKAWTGNGKASKEAMIDEARRRGFRVGAEED DTADALAIMHLGMSMEGIQ
Sequences:
>Translated_179_residues MTTDITTEFDVAEAPPALGGLNLLALDLGTQCGWALSKGGVLTYGTKNFSAKRTDGPGQRWLKFRAMLGNHFAAAGEIHA IYYEHVMAHGTKDHPNTIAAHVYGGFLAHLEAWCDVQRVRLVAVSVGTVKKAWTGNGKASKEAMIDEARRRGFRVGAEED DTADALAIMHLGMSMEGIQ >Mature_178_residues TTDITTEFDVAEAPPALGGLNLLALDLGTQCGWALSKGGVLTYGTKNFSAKRTDGPGQRWLKFRAMLGNHFAAAGEIHAI YYEHVMAHGTKDHPNTIAAHVYGGFLAHLEAWCDVQRVRLVAVSVGTVKKAWTGNGKASKEAMIDEARRRGFRVGAEEDD TADALAIMHLGMSMEGIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19298; Mature: 19167
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDITTEFDVAEAPPALGGLNLLALDLGTQCGWALSKGGVLTYGTKNFSAKRTDGPGQR CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEECCCCEEEECCCCCCCCCCCCCHHH WLKFRAMLGNHFAAAGEIHAIYYEHVMAHGTKDHPNTIAAHVYGGFLAHLEAWCDVQRVR HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHE LVAVSVGTVKKAWTGNGKASKEAMIDEARRRGFRVGAEEDDTADALAIMHLGMSMEGIQ EEEEECCCCHHHCCCCCCCHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TTDITTEFDVAEAPPALGGLNLLALDLGTQCGWALSKGGVLTYGTKNFSAKRTDGPGQR CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEECCCCEEEECCCCCCCCCCCCCHHH WLKFRAMLGNHFAAAGEIHAIYYEHVMAHGTKDHPNTIAAHVYGGFLAHLEAWCDVQRVR HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHE LVAVSVGTVKKAWTGNGKASKEAMIDEARRRGFRVGAEEDDTADALAIMHLGMSMEGIQ EEEEECCCCHHHCCCCCCCHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA